Escherichia coli O6 K2 H1 CFT073 (UPEC): c0248
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Entry
c0248 CDS
T00106
Symbol
dniR
Name
(GenBank) Membrane-bound lytic murein transglycosylase D precursor
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecc01011
]
c0248 (dniR)
Enzymes [BR:
ecc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
c0248 (dniR)
Peptidoglycan biosynthesis and degradation proteins [BR:
ecc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
c0248 (dniR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM_RLK
LysM3_LYK4_5
NMB0315_dom_I
LysM1_NFP_LYK
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
AAN78738
UniProt:
P0AEZ8
LinkDB
All DBs
Position
complement(244220..245578)
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AA seq
452 aa
AA seq
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MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQARWMDDGTSIAPDGDLW
AFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPMELVL
LPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALNMMQRL
NKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQETKQYVPKMLALSDI
LKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLKTFNAGVKGSTLGAS
GPQYVMVPKKHADQLRESLASGEIAAVQSTLVADNTPLNSRVYTVRSGDTLSSIASRLGV
STKDLQQWNKLRGSKLKPGQSLTIGAGSSAQRLANNSDSITYRVRKGDSLSSIAKRHGVN
IKDVMRWNSDTANLQPGDKLTLFVKNNNMPDS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaaagcgatattactcgcctctgtcctgctcgtgggttgccagagtaccggc
aacgttcaacagcacgcacagagcctttctgcagctggtcaaggggaagcagcaaagttt
acaagtcaggcacgatggatggacgatgggacgtctatcgcgccagatggtgacttgtgg
gctttcattggcgacgagctaaagatgggaattccggaaaacgaccggattcgcgaacag
aaacagaaatatttacgcaataagagctatctccacgatgtaactttacgggcagagccg
tatatgtactggatagccgggcaagttaaaaaacgtaacatgcctatggaactggtacta
ctacccatagtggagagcgcttttgatcctcacgcaacgtctggcgccaatgccgcgggc
atctggcagatcattccgagcacggggcgcaattatggtttgaaacagacacgcaattat
gacgcgcgtcgcgatgttgttgcttcaacaactgccgcgctgaacatgatgcagcgtctg
aacaagatgtttgacggcgactggcttctgaccgtagcggcttataacagcggcgaaggt
cgggtcatgaaggcaattaaaacgaacaaagcgcgtgggaaatccacggacttctggtcg
ttaccgttgccgcaggaaacgaagcagtacgtgcctaaaatgctggcattgagtgatatt
ctcaaaaacagcaagcgttatggcgtacgtctgccaacgaccgatgaaagccgtgctctg
gcgcgtgtgcacctgagcagcccggttgaaatggcgaaggttgcagatatggcggggatt
tccgtcagcaagctgaagacattcaacgcaggcgtgaaaggctccacgctgggcgcaagt
ggtccgcagtacgtgatggtgccaaagaagcatgcagatcaactgcgtgaatctctggct
tcaggcgaaattgctgctgtacagtcgacgctggttgccgacaatacgccgcttaacagc
cgtgtttacaccgtacgctctggcgacacgctttcaagtatcgcttcacgtctcggcgta
agcaccaaagatttgcagcagtggaacaaactgcgcggatctaagctgaagccaggccaa
agtttgacgattggtgcaggcagtagcgcacagcgactggcaaacaacagcgatagcatt
acgtatcgtgtgcgcaaaggcgattcgctttcaagcattgctaaacgccacggcgtgaac
atcaaagatgtaatgcgctggaacagcgacactgcgaatctgcaaccaggcgataagctg
acgttgtttgtgaaaaacaacaacatgccagattcctga
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