Escherichia coli O6 K2 H1 CFT073 (UPEC): c0319
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Entry
c0319 CDS
T00106
Name
(GenBank) Putative oligogalacturonide lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Pathway
ecc00040
Pentose and glucuronate interconversions
ecc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
c0319
Enzymes [BR:
ecc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
c0319
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
AAN78807
UniProt:
A0A0H2V4G7
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Position
289986..291158
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AA seq
390 aa
AA seq
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MAKGDIKKLKFESFYDSESNNEVIRLTPTDILCHRNYFYQKCFTNDGKKLIFAAEFDCNR
NYYLMDLVTQTAKQLTEGAGDNTFGGFLSPDDNYLFYVKNEKHLQRVDLTTLEEVTIYTV
PDNWVGYGTWVANTDCTEIVGIEISKTDWTPLSDWKIFLEFYHKNPRCRLITIDLETGNA
EVILDRNTWLGHPIFRPNNNDTIAFCHEGPHDLVDARMWMINRDGTNERKVHEHQLGESC
THEFWIPDGSALAYVSYMKGQQQRYIRKYNPDTDEDSLVMEMPACSHLMSNHNGILYVGD
GSGSPVDVKDTCSYKIENDPWIYILSSKNKKIHKLVKHNSSWRVQKGDRQVTHPHPSFSP
DNKYVLYSCDAEGEPALYMAKIPEEILTQQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggctaagggtgatattaaaaagttgaagtttgaatctttctacgatagtgaatcgaat
aacgaagttattcgattaacgccaacagatattctttgccatcgcaattatttttatcaa
aaatgttttacaaatgatggtaaaaaattgattttcgctgctgagtttgattgtaaccgg
aattattatcttatggatttggtaactcagacagcgaaacaactcactgaaggagctgga
gataacacctttggtggcttcctgtcccctgatgataattatcttttttatgtgaagaat
gaaaaacatttgcagcgtgttgatttgaccacattagaagaagttaccatatacacagta
ccggataattgggtggggtacggaacatgggttgctaatactgattgtacggaaatcgtc
ggaatcgaaatcagtaaaactgactggaccccgcttagcgactggaaaatatttctggaa
ttttatcataagaatccacgatgccgtttaattacgattgatctggaaaccggaaacgct
gaagtgatattggatcgtaatacttggttagggcatccaatttttcgtccgaataataac
gatactatcgccttttgccacgaagggccccatgacctggtggatgcaagaatgtggatg
attaaccgtgatgggacaaatgagcgtaaagtgcatgagcaccaacttggtgaaagttgt
acacacgagttctggatccctgatggatctgcactggcttatgtttcctatatgaaagga
cagcaacagcgttatattcgcaaatataatcctgatactgatgaagattcattagtgatg
gaaatgccggcatgttcccatttaatgagtaaccataatggtattctctatgttggtgat
ggttcaggtagtccggttgatgttaaagatacctgcagttataaaattgaaaatgatccc
tggatttacattcttagcagtaaaaataaaaaaatacataaattggtgaaacataatagt
tcctggagggtacagaaaggagaccggcaggtaacgcacccgcatccatcattttctcca
gataataagtacgttttatattcttgcgatgccgaaggtgaaccagcactatatatggct
aaaattcctgaggaaatcttaacccagcaataa
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