Escherichia coli O6 K2 H1 CFT073 (UPEC): c1067
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Entry
c1067 CDS
T00106
Symbol
ycbB
Name
(GenBank) Hypothetical protein ycbB
KO
K21470
L,D-transpeptidase YcbB
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecc01002
]
c1067 (ycbB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecc01011
]
c1067 (ycbB)
Peptidases and inhibitors [BR:
ecc01002
]
Cysteine peptidases
Family C82
c1067 (ycbB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ecc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
c1067 (ycbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
DUF4389
Motif
Other DBs
NCBI-ProteinID:
AAN79535
UniProt:
A0A0H2V7W4
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Position
1032007..1033854
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AA seq
615 aa
AA seq
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MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAVSEQGEALPQAQATAIM
AGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQL
AEVAIAGFQPQFNKWVELLTDPGVNGMTRDVVLSDAMMGYLHFIANIPVKGTRWLYSSKP
YALSTPPLSVINQWQLALDKGQLPTFVVGLAPQHPQYAAMHESLLALLSDTKPWPQLTGK
ATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTIETAETKPMD
KQTTSRSKPAPVVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLA
LNIQRLRLLPTELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVV
VNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNNREAIDPWQVDWSTITASNLP
FRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANM
LLQDAGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPA
RSSSQIVSKAEQLIR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaatatgatgtgtggtcgtcggctgtcggcaatcagtttgtgcctggccgta
acattcgctccactgttcaatgcgcaggccgatgagcctgaagtaatccctggcgacagc
ccggtggctgtcagtgaacagggcgaggcactgccgcaggcgcaagccacggcaataatg
gcggggatccagccattgcctgaaggtgcggcagaaaaagcccgcacgcaaatcgaatct
caattacccgcaggttacaagccggtttatcttaaccagcttcaactgttgtatgccgca
cgcgatatgcaacccatgtgggaaaaccgtgatgctgttaaagccttccagcaacagctg
gcagaggtggcgattgccggtttccagccgcagtttaataaatgggtagagttactgacc
gatcctggtgttaacgggatgacacgcgacgtggtgctctctgatgcgatgatgggctat
ctccatttcattgcaaatattccggtcaaaggcactcgctggctatatagcagtaaacct
tatgcgctttcaacgccgccgctttcggtgattaaccaatggcagctggcgctggataaa
ggtcaattgccgacgtttgttgtaggattggcaccgcagcatccgcaatatgcggcgatg
catgaatcgttactggccttactcagtgacaccaaaccgtggccccaactgaccggcaaa
gcaacgttgcgcccaggacagtggagtaacgacgtaccggcgttgcgcgaaatattgcaa
cgtacaggcatgttggacgggggaccgaaaattacgctacctggcgatgacacgccaact
gacgcggtagtcagcccatccgctgttactattgaaacagcagaaactaagccgatggac
aagcaaactacgtctcgtagtaaacctgcgcctgtcgttcgtgccgcctacgataatgaa
ctggtggaagccgttaaacgttttcaggcatggcaaggattgggggcagatggtgctatt
ggcccggcaacgcgtgactggttaaacgtaacgcccgcccagcgtgctggcgtgttggca
ctcaacatccagcgattgcgcttgctgccaacagagctttctaccgggatcatggttaac
attccggcctattcgctggtctactatcagaacggcaatcaggtgctggattcgcgagtc
attgtcggtcgccccgatcgcaaaacgccaatgatgagcagtgcccttaacaacgtagtg
gtaaacccgccgtggaacgtcccaccaactctggcacgcaaagatattctgccgaaagtg
cgcaacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacaac
agagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccg
ttccgcttccagcaggctccaggcccacggaactcgctggggcgctataaattcaatatg
ccgagttcagaggccatttatttgcatgacacgccgaaccacaatctgttcaagcgtgat
acacgcgcattgagctcaggctgtgtacgagtgaataaagcttccgatctggcgaatatg
ctgttgcaggatgcaggctggaatgacaaacgtatttctgatgcgctgaagcagggcgat
acgcgttacgtcaatattcggcagtcgattccggtgaatctctactatctgacggccttt
gttggtgcagatggtcgtacccagtatcgtacagatatttacaattatgatctgcctgcg
cgatccagctcgcaaatcgtatcgaaagcggaacaattaatcaggtaa
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