Escherichia coli O6 K2 H1 CFT073 (UPEC): c1150
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Entry
c1150 CDS
T00106
Symbol
ycdC
Name
(GenBank) Hypothetical transcriptional regulator ycdC
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecc03000
]
c1150 (ycdC)
Transcription factors [BR:
ecc03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
c1150 (ycdC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
AAN79618
UniProt:
P0ACU3
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All DBs
Position
1107710..1108375
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AA seq
221 aa
AA seq
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MPINKRGERMTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVS
KTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQA
SRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQ
HYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
ttgccaatcaacaagaggggagagcgcatgacgcaaggcgcagtgaaaacaacgggtaag
cgttcgcgcgcagtaagcgcgaagaaaaaagcgattcttagcgcagcactggacactttt
tcacaattcggttttcacggcacaaggctggagcagatcgcggagttggcgggtgtttca
aaaaccaatctgctgtattactttccgtcaaaagaggcgctgtatatagccgtactgcgg
cagattctcgatatctggctggcaccgttaaaagcgtttcgagaagatttcgccccgctg
gcggcgatcaaagaatacatccgtctgaagctggaagtttcccgcgattatccgcaggct
tcgcgcctgttctgtatggagatgctggcaggtgcaccgctgttaatggatgaactgacg
ggcgatttgaaggcattaattgatgagaaatcggcgctcattgccggttgggttaaaagc
ggcaaactcgcgccgattgacccgcagcatttgatttttatgatttgggcttccactcaa
cattacgccgattttgcccctcaggtggaggcggtgacaggcgcgacgttgcgcgatgag
gtgtttttcaatcaaacggttgaaaacgtgcagcggattattattgaggggattcgacca
cgttaa
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