Escherichia coli O6 K2 H1 CFT073 (UPEC): c1242
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Entry
c1242 CDS
T00106
Symbol
focD
Name
(GenBank) F1C fimbrial usher
KO
K07347
outer membrane usher protein
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Pathway
ecc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
c1242 (focD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecc02000
]
c1242 (focD)
02044 Secretion system [BR:
ecc02044
]
c1242 (focD)
02035 Bacterial motility proteins [BR:
ecc02035
]
c1242 (focD)
Transporters [BR:
ecc02000
]
Other transporters
Pores ion channels [TC:
1
]
c1242 (focD)
Secretion system [BR:
ecc02044
]
Chaperone-usher system
Type 1 pilus assembly protein
c1242 (focD)
Bacterial motility proteins [BR:
ecc02035
]
Pilus system
Fimbrial proteins
c1242 (focD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
AAN79699
UniProt:
A0A0H2V6Z7
LinkDB
All DBs
Position
1190123..1192801
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AA seq
892 aa
AA seq
DB search
MCLAADFIFSLSVGADMFFGDGGQLLSDKSLTGSAGGGNNRMKFNILPLAFFIGIIVSPA
RAELYFNPRFLSDDPDAVADLSAFTQGQELPPGVYRVDIYLNDTYISTRDVQFQMSQDGK
QLAPCLSPEHMSAMGVNRYAVPGMERLPADTCTSLNSMIQGATFRFDVGQQRLYLTVPQL
YMSNQARGYIAPEYWDNGITAALLNYDFSGNRVRDSYGGTSDYAYLNLKTGLNIGSWRLR
DNTSWSYSAGKGYSQNNWQHINTWLERDIVSLRSRLTMGDSYTRGDIFDGVNFRGIQLAS
DDNMVPDSQRGYAPTIHGISRGTSRISIRQNGYEIYQSTLPPGPFEINDIYPAGSGGDLQ
VTLQEADGSVQRFNVPWSSVPVLQREGHLKYALSAGEFRSGGHQQDNPRFAEGTLKYGLP
AGWTVYGGAWIAERYRAFNLGVGKNMGWLGAVSLDATRANARLPDESRHDGQSYRFLYNK
SLTETGTNIQLIGYRYSTRGYFSFADTAWKKMSGYSVLTQDGVIQIQPKYTDYYNLAYNK
RGRVQVSISQQTGESSTLYLSGSHQSYWGTDRTDRQLNAGFNSSVNDISWSLNYSLSRNA
WQHETDRILSFDVSIPFSHWMRSDSTSAWRNASARYSQTLEAHGQAASTAGLYGTLLGDN
NLGYSIQSGYTRGGYEGSSKTGYASLNYRGGYGNASAGYSHSGGYRQLYYGLSGGILAHA
NGLTLSQPLGDTLILVRAPGASDTRIENQTGVSTDWRGYAVLPYATDYRENRVALDTNTL
ADNVDIENTVVSVVPTHGAVVRADYKTRVGVKVLMTLMRNGKAVPFGSVVTARNGGSSIA
GENGQVYLSGMPLSGQVSVKWGSQTTDQCTADYKLPKESAGQILSHVTASCR
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
ttgtgtttggctgctgattttattttttcgctcagtgtgggggctgacatgtttttcgga
gatggcggacagctcctgtctgataaatcactgaccggctctgctggcgggggtaataac
agaatgaaatttaatatactgccgctggcattttttatcgggataattgtttctccggcc
cgggctgagctctattttaatccgcgttttctgtctgatgacccggatgcggttgcggac
ctgtctgcatttacacaggggcaggagcttccgccaggcgtgtaccgggtggatatttat
ctgaatgatacgtatatctcaacccgtgacgtgcagtttcagatgagtcaggacgggaag
caacttgccccctgcctgagtccggagcatatgagtgcgatgggggtaaaccgttatgcc
gtgccgggtatggagagactgccggctgacacctgcacatcactgaattccatgattcag
ggtgccacattccggtttgatgtcgggcagcagcgattgtacctgaccgttcctcagtta
tatatgagtaatcaggcccgtggttatattgcgccggaatactgggataacggaattaca
gcggcattgctgaattatgacttcagtggtaatcgggtgcgcgacagctatggtggcacc
agcgattatgcctatctgaatctgaaaacaggactgaatatcgggagctggcgtcttcgg
gacaacaccagctggagttacagtgccggaaaggggtacagccagaataactggcagcac
attaacacctggctggagcgggatatagtttccctgcgctcccgtctgacgatgggggac
agttatacccggggggatatttttgacggtgtaaatttcagggggattcaactggcctct
gatgacaatatggttccggacagccagagagggtatgcaccgacaattcacggtatttcc
cggggaacatcccggattagtatccgccagaacgggtatgaaatttaccagagtacgcta
cctccaggcccgttcgagataaacgatatttatccggccgggagtggaggtgacttacag
gtaaccctgcaggaagctgatggcagtgtacagcgatttaatgtgccatggtcttcggtg
cctgtactgcaacgtgaagggcatctgaaatatgctctcagtgccggagagtttcgcagt
ggcggacatcagcaggataatccccgttttgctgaaggaacgctgaagtatggtctgccg
gcaggctggacggtgtatggaggagcctggatagctgaacgctaccgtgccttcaatctg
ggggtgggtaaaaacatgggctggctgggcgctgtttcactggatgccacccgtgcgaat
gcccggttaccggatgaaagccggcatgacggtcagtcatatcgttttctgtataacaag
tcactgacggaaacagggacaaatatccagttaatcggataccgctactccacacggggc
tatttcagctttgctgataccgcctggaagaaaatgagtggttacagtgttcttacccag
gacggagtgatacagatacagccgaagtatacggattactacaatctggcttacaacaag
cggggaagggtgcaggtgagtatcagccagcagacgggggaatcgtcaacgttgtatctg
agtggcagccaccagagttactggggaacggacaggacggaccgtcagcttaatgctggc
tttaactcatctgtgaatgacatcagctggtccctgaactacagcctgtcccggaatgca
tggcaacatgaaactgaccggatactgtcatttgatgtcagcattccgttcagccactgg
atgcgttcggacagcacatctgcatggagaaacgccagtgcccgttacagtcagaccctg
gaggctcacggacaggctgccagtacagcagggctgtatggcacattgctgggggacaat
aatctgggatacagcatccagagtggttatacccggggagggtatgaggggagcagtaaa
acaggatatgcctctctgaattacagagggggatacggtaatgccagtgcaggatacagt
cacagtgggggctaccggcaactgtattatgggctgagtggcggtattctggcacatgcc
aatggtctgacactgagccagcctctgggagatacgctgattcttgtccgtgcaccaggt
gcatctgatacgcgcattgaaaaccagacgggggtgtctacagactggagggggtatgct
gtactgccttatgcaacagactatcgtgaaaaccgggtggcactggataccaacaccctt
gcagataatgttgatatagagaataccgtggtcagcgtcgtgcccacgcatggtgccgtt
gtgcgggctgactataaaacccgtgtgggtgtgaaagtgctgatgacgctgatgagaaac
gggaaagcagttccttttggctctgtcgttacggccagaaacggggggagcagtatcgcc
ggagagaatggtcaggtttatctgagcggaatgcctctgtcaggacaggttagtgtgaaa
tgggggagtcagaccacggaccagtgtactgcagattataaattaccgaaggaaagcgcc
ggacagatattaagtcatgtcacggctagttgcaggtaa
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