Escherichia coli O6 K2 H1 CFT073 (UPEC): c1371
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Entry
c1371 CDS
T00106
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Pathway
ecc03030
DNA replication
ecc03430
Mismatch repair
ecc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
c1371 (holB)
03430 Mismatch repair
c1371 (holB)
03440 Homologous recombination
c1371 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecc03032
]
c1371 (holB)
03400 DNA repair and recombination proteins [BR:
ecc03400
]
c1371 (holB)
Enzymes [BR:
ecc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
c1371 (holB)
DNA replication proteins [BR:
ecc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
c1371 (holB)
DNA repair and recombination proteins [BR:
ecc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
c1371 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
DUF8054_M
NodI_C
EPF
Motif
Other DBs
NCBI-ProteinID:
AAN79841
UniProt:
A0A0H2V796
LinkDB
All DBs
Position
1299263..1300267
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AA seq
334 aa
AA seq
DB search
MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG
HCRGCQLMQAGTHPDYYTLAPEKGKNALGIDAVREVTEKLNEHARLGGAKVVWVTDAALL
TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV
TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVQSGDWYSLLAALNHEQ
APARLHWLATLLMDALKRHYGAAHVTNVDVPGLVVELANHLSPSRLQAILGDVCHIREQL
MSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagatggtatccatggttacgacctgatttcgaaaaactggtagccagctatcaggcc
ggaagaggtcaccatgcgctactcattcaggcgttaccgggcatgggtgatgatgcttta
atctacgccctgagccgttatttactctgccaacaaccgcagggccacaaaagttgcggt
cactgtcgtggatgtcagttgatgcaggctggcacacatcccgattactacaccctggct
cccgaaaaagggaaaaatgcgctgggcattgatgcggtacgtgaggtcaccgaaaagctg
aatgagcacgcacgcttaggtggtgcgaaagttgtctgggtaaccgatgctgccttacta
accgacgccgcggctaacgcattgctgaaaacgcttgaagagccaccagcagaaacgtgg
tttttccttgctacccgcgagccagaacgtttactggcaacattacgtagtcgttgtcgg
ttacattaccttgcgccgccgccggaacagtacgccgtgacctggctttcacgcgaagtg
acaatgtcacaggatgcactacttgccgcattgcgcttaagcgccggttcgcctggggcg
gcactggcgttgtttcagggagataactggcaggctcgtgaaacattgtgtcaggcgctg
gcatatagcgtgcaatcgggcgactggtattcgctgctggcggcccttaatcatgaacaa
gctccggcgcgtttacactggctggcaacgttgctgatggatgcgctaaaacgccattat
ggcgctgcgcacgtgaccaatgttgatgtgccggggctggtcgtcgaactggcaaaccat
ctttctccctcgcgcctgcaggctatactgggggatgtttgccacattcgtgaacagtta
atgtctgtcacaggtatcaaccgcgagcttctcatcaccgatcttttactgcgtattgag
cattacctgcaaccgggcgttgtgctaccggttcctcatctttaa
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