Escherichia coli O6 K2 H1 CFT073 (UPEC): c2330
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Entry
c2330 CDS
T00106
Symbol
sdiA
Name
(GenBank) Regulatory protein sdiA
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Pathway
ecc02020
Two-component system
ecc02024
Quorum sensing
ecc02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
c2330 (sdiA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
c2330 (sdiA)
02026 Biofilm formation - Escherichia coli
c2330 (sdiA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecc03000
]
c2330 (sdiA)
Transcription factors [BR:
ecc03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
c2330 (sdiA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_20
Sigma70_r4
HTH_10
DUF722
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AAN80789
UniProt:
A0A0H2V844
LinkDB
All DBs
Position
complement(2144786..2145520)
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AA seq
244 aa
AA seq
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MRFTMQDTDFFSWLRTMLLRFQRMEAAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPK
VAFYTNYPESWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLR
RGVTQYLMLPNRALGFLSFSRCSTREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP
EMNFSKREKEILKWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA
TGLI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
ttgcggtttactatgcaggatacggattttttcagctggcttcgcacgatgttgttgcgt
tttcagaggatggaggccgcagaagaggtctaccatgaaatagagcttcaggctcagcag
ctggagtacgattactattcgttatgtgttcgccacccggtaccattcacgcgacctaaa
gtggctttctacaccaattaccctgagtcgtgggttagttattatcaggcaaaaaatttt
ctcgcaattgatccggtgctgaaccctgaaaactttagtcagggccatttaatgtggaat
gatgacttattcagcgaagcacagccgttatgggaagctgcgcgcgcacatggtttacgc
cgcggtgtcactcagtatttaatgctgccaaatcgggcgttgggctttttgtccttttcc
cgttgcagcacgcgcgaaatacccattcttagtgatgaactgcaattaaaaatgcagcta
ctggtgcgcgaaagtctgatggctctgatgcgtttaaatgatgaaatagtgatgacgcca
gagatgaatttcagcaagcgcgaaaaagaaattctgaaatggacggcggaaggtaagaca
tcagcagagatagcgatgattttgtcaatctctgagaatacggtcaatttccatcagaaa
aacatgcagaaaaaaatcaatgcaccgaataagacgcaggttgcctgttacgcggccgct
actggcttaatttga
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