Escherichia coli O6 K2 H1 CFT073 (UPEC): c3263
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Entry
c3263 CDS
T00106
Symbol
ygaA
Name
(GenBank) Hypothetical sigma-54-dependent transcriptional regulator ygaA
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecc03000
]
c3263 (ygaA)
Transcription factors [BR:
ecc03000
]
Prokaryotic type
Helix-turn-helix
Other families
c3263 (ygaA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
GAF_2
Mg_chelatase
AAA_5
MCM
AAA
GAF_3
AAA_16
AAA_2
AAA_19
AAA_22
AAA_30
DBD_HTH
HTH_8
Motif
Other DBs
NCBI-ProteinID:
AAN81714
UniProt:
Q8FEN6
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All DBs
Position
complement(3113245..3114834)
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AA seq
529 aa
AA seq
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MSSQNDYQSNGRYDNIYSQIDSEAKMSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQV
LECDASALLRYDSRQFIPLAIDGLAKDVLGRRFALEGHPRLEAIARAGDVVRFPADSELP
DPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAG
ALSNALLIEQLESQNMLPGEAAPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISG
ETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKF
EMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEV
LAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRLGLSRVVLSAGARNLL
QHYNFPGNVRELEHAIHRAVVLARATRSGDEVILEAQHFAFPEVTLPPPEVAAVPVVKQN
LREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGLKD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcaaaatgactatcaatcaaatggtcgatatgacaatatctatagtcaaatt
gacagtgaggcaaagatgagtttttccgttgatgtgctggcgaatatcgccatcgaattg
cagcgtgggattggtcatcaggatcgttttcaacgcctgatcaccacgctgcgtcaggtg
ctggagtgcgatgcgtctgcgttgctacgttacgactcgcggcagtttattccgcttgcc
atcgacgggctggcgaaggatgtactcggtagacgctttgcgctggaagggcatccacgg
ctggaagcgattgcccgcgcgggtgatgtggtgcgctttcccgcagacagcgaattgccc
gatccttatgacggtttgattccagggcaggagagtctgaaggttcacgcctgcgttggt
ttgccgttgtttgccgggcaaaacctgatcggtgccttgacgctcgacgggatgcagccc
gatcagttcgatgttttcagcgacgaagagttacgcctgattgctgcgctggcggcggga
gcgttaagcaatgcgttactgattgaacaactggaaagccagaatatgctgccaggcgaa
gccgcgccgtttgaagcggtgaaacagacgcagatgatcggtctgtcgccaggcatgacg
caattgaaaaaagagattgagattgtggcggcatccgatctcaacgttttaattagcggt
gagacgggaaccggtaaggagctggtggcgaaagcgattcatgaagcctcgccacgggcg
gtgaatccgctggtctatctcaactgtgccgcactgccggaaagtgtggcggaaagtgag
ttgttcgggcatgtgaaaggggcgtttactggtgctatcagtaaccgcagcgggaagttt
gaaatggcggataacggcacgctgtttctcgatgagatcggcgagttgtcgttggcattg
caggccaagctgctgagggtgttgcagtatggcgatattcaacgcgttggcgatgaccgc
agtttgcgggtcgatgtgcgcgtgctggcggcgactaaccgtgacttacgcgaagaggta
ctggcagggcgatttcgcgctgacttgttccaccgcctgagcgtgtttccactttcagtg
ccgccgctgcgtgagcggggcgatgatgtcattctgctggcggggtatttctgcgagcag
tgtcgtttgcggctggggctctcccgagtggtattaagtgccggagcgcgaaatttactg
caacactacaattttccggggaacgttcgtgaactggaacatgctattcatcgggcggta
gtgctggcgagagcaacccgcagcggcgatgaagtgattcttgaggcgcaacattttgct
tttcctgaggtgacgttgccgccgccagaagtggcggcggtgcccgttgttaagcaaaac
ctgcgtgaagcgacagaagcgttccagcgtgaaaccattcgtcaggcactggcgcaaaat
catcacaactgggccgcctgtgcgcggatgctggaaaccgacgtcgccaacctgcatagg
ctggcgaaacgtctggggctgaaggattaa
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integrated database retrieval system
