Escherichia coli O6 K2 H1 CFT073 (UPEC): c3958
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Entry
c3958 CDS
T00106
Symbol
yrbI
Name
(GenBank) Hypothetical protein yrbI
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Pathway
ecc00541
Biosynthesis of various nucleotide sugars
ecc01100
Metabolic pathways
ecc01250
Biosynthesis of nucleotide sugars
Module
ecc_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
c3958 (yrbI)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecc01005
]
c3958 (yrbI)
Enzymes [BR:
ecc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
c3958 (yrbI)
Lipopolysaccharide biosynthesis proteins [BR:
ecc01005
]
Lipid A
c3958 (yrbI)
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Motif
Pfam:
Hydrolase_3
Hydrolase
S6PP
HAD_2
Motif
Other DBs
NCBI-ProteinID:
AAN82398
UniProt:
P67653
Structure
PDB
PDBj
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All DBs
Position
3775766..3776332
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AA seq
188 aa
AA seq
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MSKAGASLATCYGPVSADVMAKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGY
GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENV
AYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKL
DEAKGQSI
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcaggtgcgtcgcttgcgacctgttacggccctgtcagcgccgacgttatg
gcaaaagcagagaacattcgtctgctgatcctcgacgttgatggcgtactgtcagatggc
ctgatttatatgggcaataacggcgaagagctgaaagcgttcaatgttcgtgacggttat
ggcattcgttgtgcgctcacctctgatattgaagtcgctatcattaccgggcgaaaggct
aaactggtagaagatcgttgtgccacattggggatcactcacttgtatcaggggcagtca
aacaaactgatcgcctttagcgatctgctggaaaaactggcgattgccccggaaaatgtg
gcttatgtcggcgatgatctcatcgactggccggtaatggaaaaagtgggtttaagcgtc
gccgtggccgatgcgcatccactgttgatcccgcgcgccgattacgtaacgcgcattgct
ggcggtcgtggcgcagtgcgagaagtttgcgacttattactcctggcgcagggcaaactg
gatgaagccaaagggcaatcgatatga
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