Escherichia coli O6 K2 H1 CFT073 (UPEC): c4212
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Entry
c4212 CDS
T00106
Symbol
ycbS
Name
(GenBank) Hypothetical outer membrane usher protein ycbS precursor
KO
K07347
outer membrane usher protein
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Pathway
ecc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
c4212 (ycbS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecc02000
]
c4212 (ycbS)
02044 Secretion system [BR:
ecc02044
]
c4212 (ycbS)
02035 Bacterial motility proteins [BR:
ecc02035
]
c4212 (ycbS)
Transporters [BR:
ecc02000
]
Other transporters
Pores ion channels [TC:
1
]
c4212 (ycbS)
Secretion system [BR:
ecc02044
]
Chaperone-usher system
Type 1 pilus assembly protein
c4212 (ycbS)
Bacterial motility proteins [BR:
ecc02035
]
Pilus system
Fimbrial proteins
c4212 (ycbS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
AAN82650
UniProt:
A0A0H2VD70
LinkDB
All DBs
Position
complement(3995436..3998030)
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AA seq
864 aa
AA seq
DB search
MNLKLKRCEYWMAAQKQMKRVVPLLLVIMPACSIAGMRFNPAFLSGDTEAVADLSRFEKG
MTYLPGSYEVEVWVNDSPLLSRTVTFKADDENQLIPCLSLADLLSLGINKNALPEQALAS
SENSCLDLRIWFPDVHYMPELDAQRLKLTFPQAIIKRDARGYIPPEQWDNGITAFLLNYD
FSGNNDRGDYSSNNYYLNLRAGINIGAWRFRDYSTWSRGSNSAGKLEHISSTLQRVIIPF
RSELTLGDTWSSSDVFDSVSIRGIKLESDENMLPDSQSGFAPTVRGIAKSRAQVTIKQNG
YVIYQTYMPPGPFEISDLNPTSSAGDLEVTIKESDNSETVYTVPYAAVPILQREGHLKYS
TTVGQYRSNSYNQKSPYVFQGELIWGLPWDITAYGGAQFSEDYRALALGLGLNLGVFGAT
SFDVTQANSSLVDGSKHQGQSYRFLYSKSLVQTGTAFHIIGYRYSTQGFYTLSDTTYQQM
SGTVVDPKTLDDKDYVYNWNDFYNLRYSKRGKFQASVSQPFGNYGSMYLSASQQTYWNTD
KKDSLYQVGYNTSIKGIYLNVAWNYSKSPGTNADKIVSLNVSLPISNWLSSTNDGRSSSN
AMTATYGYSQDNHGQVNQYTGVSGSLLEQHNLSYNIQHGFANQDNSSSGSVGVNYRGAYG
SLNSAYSYDNEGNQQINYGISGALVVHENGLTLSQPLGETNVLIKAPGANNVDVQRGTGI
STDWRGYAVVPYATEYRRNNISLDPMSMNMHTELDITSTEVIPGKGALVRAEFAAHIGIR
GLFTVRYRNKSVPFGATASAQIKNSSQITGIVGDNGQLYLSGLPLEGVINIQWGDGVQQK
CQANYKLPETELDNPVSYATLECR
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaacctaaagctcaaaagatgcgaatattggatggcggcacaaaagcagatgaaacgg
gttgtgccgcttcttctggttattatgcctgcatgttcaatcgcgggaatgcgctttaac
cctgcttttctgtcgggtgatactgaagctgttgctgacttatcccgcttcgagaaaggg
atgacttatcttcctggtagctatgaagtcgaagtttgggtcaatgattcccctttactc
tctcgtactgtaacttttaaagcagacgatgagaatcaactgattccctgcctttcactt
gctgacttattaagccttggaattaacaaaaatgcgctgccagagcaggctttggcttca
tctgaaaatagttgccttgatttgcgtatctggtttcccgatgtgcattacatgccggag
ctggatgcacagagacttaaactgacctttccacaggcgataataaaacgtgacgctcgc
ggatatattccaccagaacagtgggataacggtattacagcttttttgctgaattatgac
ttttctggtaataacgatcgtggtgattactcttcaaataactattatttaaatcttcgc
gctgggatcaatattggtgcatggcgttttcgcgattattcaacctggagtcgtgggagt
aattcagcaggtaaactggagcatatcagtagtacgttgcagcgcgttattattcctttc
agaagtgaattaacgctaggagatacatggtcatcatcagatgttttcgacagtgttagt
attcgtggcataaaactggaatctgacgaaaatatgttgcccgatagtcaaagtggtttc
gctcccacggtgcgcggaattgcgaaaagtcgcgctcaggtaacaatcaaacagaatggt
tatgtcatttatcaaacctatatgccgccgggaccgtttgagattagcgatcttaacccg
acatcatctgcgggagatctggaagttaccatcaaagagtctgataattcagaaactgtc
tataccgtaccttatgccgctgtccccatcctgcaacgagaaggtcatttaaaatattct
actacggttggccaatatcgaagcaatagctataaccagaaaagtccttatgtatttcag
ggggaattaatttggggtttaccctgggatattacggcttatggtggggcacaattctct
gaggattaccgggcgttggcgctcggccttggcctgaatctgggtgtatttggtgcaaca
tcgtttgatgttactcaggctaacagttcgcttgtggatgggagcaaacatcaagggcaa
tcttatcgttttctttattccaaatcgttagttcagacaggaacagcattccatattatt
ggctatcgttattcaacccagggcttttacactttaagtgatacgacataccaacaaatg
tcagggactgttgttgatccaaaaacgttagatgataaagattacgtttataactggaat
gatttttataacttgcgttatagcaaacgtggaaaatttcaggctagtgtatcgcaacct
ttcggtaactacgggtctatgtatttatcggctagtcagcaaacatactggaatactgat
aaaaaagattctttataccaagttggttataacaccagtattaagggtatctatctaaat
gttgcgtggaattacagtaaatcaccagggacaaatgcggataaaattgtctcgctaaat
gtctcattacctataagtaattggttatcttccacgaatgatgggcgctcatcatcgaat
gccatgactgcaacgtatggttatagtcaggataaccacggacaggtaaaccaatatacg
ggggtatctggttctctgttggagcagcataatctcagttataacatacaacatggtttt
gctaatcaggataatagcagtagtggttctgttggtgttaattatcgtggggcatatggt
tccttgaattccgcctacagttacgataatgaaggtaatcaacaaataaactatggcatc
agtggtgctcttgttgtacatgaaaatggtcttacgttgagtcaaccattaggtgaaact
aatgttttgataaaagcgcctggagcgaataatgtggatgttcagcgggggacaggaata
tccactgactggcgtggatatgcagttgttccttatgcaacagaatatagacgtaataat
atttcattagatcctatgtcaatgaatatgcatactgaactggatatcacttccactgaa
gttattccgggaaaaggtgcgttagttcgtgcagagtttgctgctcatatcggtattcgt
ggtttgttcacagttcgttatcgtaataaatcagtcccattcggtgctacagccagcgct
cagattaaaaacagtagtcaaattaccgggattgtcggcgataatggacaactttatctc
tcaggattgcctttagaaggtgttattaatatccagtggggagacggtgttcagcaaaaa
tgtcaggctaattacaagctccctgaaacagaactggataatcctgttagctatgcaact
ctggagtgccgctaa
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