Escherichia coli O6 K2 H1 CFT073 (UPEC): c4254
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Entry
c4254 CDS
T00106
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecc03021
]
c4254 (rpoH)
Transcription machinery [BR:
ecc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
c4254 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_25
HTH_3
SANT_DAMP1_like
WASH_WAHD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AAN82690
UniProt:
P0AGB4
LinkDB
All DBs
Position
complement(4038422..4039276)
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AA seq
284 aa
AA seq
DB search
MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRF
VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDM
TFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDII
RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaatgcaaagtttagctttagccccagttggcaacctggattcctacatc
cgggcagctaacgcgtggccgatgttgtcggctgacgaggagcgggcgctggctgaaaag
ctgcattaccatggcgatctggaagcagctaaaacgctgatcctgtctcacctgcggttt
gttgttcatattgctcgtaattatgcgggctatggcctgccacaggcggatttgattcag
gaaggtaacatcggcctgatgaaagcagtgcgccgttttaacccggaagtgggtgtgcgc
ctggtctccttcgccgttcactggatcaaagcagagatccacgaatacgttctgcgtaac
tggcgtatcgtcaaagttgcgaccaccaaagcgcaacgtaaactgttcttcaacctgcgt
aaaaccaagcagcgtctgggctggtttaaccaggatgaagtcgagatggtggcccgtgaa
ctgggcgtaaccagcaaagacgtacgtgagatggaatcacgtatggcggcacaggacatg
acctttgacctgtcttccgacgacgattccgacagccagccgatggctccggtgctctat
ctgcaggataaatcatctaactttgccgacggtattgaagatgataactgggaagagcag
gcggcaaaccgcctgaccgatgcgatgcaaggtctggacgagcgtagtcaggatatcatc
cgcgcgcgctggctggatgaagacaacaagtccacgttgcaggaactggctgaccgttac
ggtgtttccgctgagcgtgtgcgtcagctggaaaagaacgcgatgaaaaaattgcgcgct
gccattgaagcgtaa
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