Escherichia coli O6 K2 H1 CFT073 (UPEC): c4488
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Entry
c4488 CDS
T00106
Name
(GenBank) Putative transcriptional Antiterminator
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
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Gene cluster
GFIT
Motif
Pfam:
PRD
HTH_11
Mga
PTS_IIB
HTH_DeoR
HTH_Mga
PuR_N
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AAN82924
UniProt:
A0A0H2VC51
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Position
complement(4268467..4270065)
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AA seq
532 aa
AA seq
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MATEALPYGVIRGKKMQMITSRQNRLLRFLLPRREYTTIVTIAGYLNVSEKTIQRDLRLL
EQWLGQWRINVEKRAGAGVMLSAENIADLLHLDHLLVAECEEIDCVMNNARRVKIASQLL
SETPNETSISKLSERYFISGASIVNDLRVIESWLAPLGLSLIRSPSGTHIEGSEGQVRQA
MALLINGIINHNEPQGVVYSRLDPGSYKALVHYFGEEEVLFVQSLLLDMENELSWSLGEP
YYVNIFTHILIMMYRNTHGNALSREEDQTRQYDENIFNVASQMIHKIDQRIAHTLPDDEV
WFIYQYIISSGVAIDGQKDVSIISHMQASNEARLITWRLITVFSDIVDCDFSEDSALYDG
LLVHIKPLINRLNYRIHIRNPLLEDIKAELADVWRLTQYVVNQVFKTWGENAVSEDEVGY
LTVHFQAAMERQIARKRVLLVCSTGIGTSHLLKSRILRAFPEWTIVDVISAANLSQVLPD
NIELIISTINLPTVTMPVAYVTAFFNDADIKRVTEMVITEKLHHATSRVVEI
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgaagctcttccatatggtgtgataaggggtaaaaaaatgcaaatgattacc
tcgcgacaaaacagattattacgattccttttacctcgaagggaatatacgactattgtt
acgattgccggctatttaaatgtttcggaaaaaaccattcaacgtgatttacgtttactt
gagcaatggctgggacaatggagaataaatgttgagaagcgtgctggcgcgggtgtgatg
ttaagtgcggagaatattgctgatttgctgcatcttgatcatttgttggtggcagaatgt
gaagagattgattgtgtaatgaataatgccaggcgcgttaaaatagcgtcgcagttatta
agtgaaacaccgaatgaaacgtcgatcagtaaattgtcagaacgctactttatcagcgga
gcctctattgttaatgacctgagagtaattgagtcctggcttgcgccgttggggttatcg
ttgatccgcagtccaagtggtacgcatattgaaggtagtgaagggcaagtccgacaggca
atggcattactgattaacggcattattaaccataatgagccgcaaggtgtcgtgtattca
cgtctggatcccggaagctataaagcattagtccattattttggagaagaagaggtgtta
tttgtccagtcattgttactggatatggaaaatgaattaagttggtctttgggagaacct
tattacgttaacatttttactcacatccttattatgatgtatcgcaacacgcacgggaat
gcgttatcaagagaagaagatcaaaccagacaatatgatgaaaatatctttaatgttgcc
agtcagatgattcataagatagatcaacgaattgcacatacattgcccgatgatgaagtc
tggtttatttatcaatatatcatttcatcaggtgtggcgattgatggacaaaaagatgtt
agcattatttcacatatgcaggccagcaatgaagcgcgtctgattacctggcgtttaatt
acggtattcagtgacatcgtggactgcgattttagtgaagacagcgcattatatgatggc
ttattggtgcatattaagccgctgattaaccgtctaaattatcgcattcatatccgtaat
ccattgctggaagatattaaagcagaattagcggatgtctggcggttgacgcaatatgtg
gtgaatcaggtatttaaaacctggggtgagaatgcagtgagcgaggatgaagtgggttac
ctgaccgttcattttcaggctgcgatggagcggcaaattgcccgtaaacgtgtattactg
gtctgttcaaccggaatcggaacttcgcatctactgaaaagccgtattctgcgagcattt
cctgaatggacgattgttgatgttatttcagcagcgaatttatcacaggttttgcctgac
aatatcgaactgattatttcgaccattaatttgcctacagtcactatgccggtcgcttat
gttaccgctttttttaatgatgccgatattaagcgggtcactgaaatggtgattacggaa
aaattacatcatgcgacgtctcgggtcgttgaaatttaa
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