Escherichia coli O6 K2 H1 CFT073 (UPEC): c5474
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Entry
c5474 CDS
T00106
Symbol
sms
Name
(GenBank) DNA repair protein radA
KO
K04485
DNA repair protein RadA/Sms
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecc03400
]
c5474 (sms)
DNA repair and recombination proteins [BR:
ecc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
c5474 (sms)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
RecA
Rad51
GvpD_P-loop
AAA_22
SLFN-g3_helicase
AAA_14
ABC_tran
AAA_16
nSTAND3
AAA_24
AAA
DUF7125
NTPase_1
cobW
Zeta_toxin
AAA_29
Zn_ribbon_Thio2
DZR
Viral_helicase1
AAA_5
AAA_30
Herpes_Helicase
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
AAN83894
UniProt:
A0A0H2VDU4
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All DBs
Position
5215245..5216675
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AA seq
476 aa
AA seq
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MPARHPAGGTALTRYTVAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPT
VARNERLSGYAGSAGVAKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNP
GAGKSTLLLQTLCKLAQQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICL
IAEEEQPKLMVIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKD
GSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPS
AIFLSRGDEVTSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAV
LHRHGGLQMADQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAG
EIRPVPSGQERISEAAKHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgcccgtcatcctgcgggcggcacagcattaacgaggtacaccgtggcaaaagct
ccaaaacgcgcctttgtttgtaatgaatgcggggccgattatccgcgctggcaggggcag
tgcagtgcctgtcatgcctggaacaccatcaccgaggtgcgtcttgctgcgtcgccaacg
gtggcgcgtaacgagcgtctcagtggctatgccggtagcgccggagtggcaaaagtccag
aaactctccgacatcagccttgaggagctgccgcgtttttctaccggatttaaagagttc
gaccgcgtattaggcggcggggtggtgccgggaagcgccattctgattggcggtaaccca
ggcgcggggaaatccacgctgctgttgcaaacgctgtgcaaactggcccagcagatgaaa
acgctgtatgtcaccggcgaagagtcgctgcaacaggtggcaatgcgcgctcatcgcctt
ggcctgccgactgacaatctcaatatgttgtcggaaaccagcatcgagcagatctgcctg
attgccgaagaagagcaaccgaagctgatggtaattgactccatccaggtgatgcatatg
gcggatgttcagtcatcgcctggcagcgtggcgcaggtgcgtgaaacggcggcttatctg
acgcgcttcgccaaaacgcgcggcgtggcgattgtcatggttgggcacgtaaccaaagat
ggctcgctggctggccctaaagtgctggaacactgtatcgactgttcggtgcttctggat
ggcgatgccgactcccgttttcgcaccttacgcagccataaaaaccgcttcggcgcggtg
aatgagctgggcgtcttcgcgatgaccgaacaggggctgcgtgaagttagcaacccttcc
gccatctttttaagccgcggtgatgaagtgacctccggtagctcagtgatggtggtatgg
gaaggaacgcgtccactgctggtggagatccaggcgctggtcgatcactcgatgatggcg
aatccacgccgcgtggcagtcgggctggagcaaaaccgtctggcaatcctgctggcggtg
ctgcaccgtcacggtgggttgcaaatggccgatcaggatgtatttgttaacgtggtcggc
ggcgtgaaggtgacggaaaccagcgccgacttagcgttactgctggcgatggtttccagc
ctgcgcgacagaccgctgccacaggatctggtggtgtttggtgaagtcgggctggcaggg
gagatccgcccggtgcccagcggtcaggaacgtatctcagaagcggcgaaacatggtttt
cggcgggcgattgttccggcggctaacgtgccgaaaaaagcgccggaagggatgcagatt
tttggcgttaaaaaactctccgacgcgcttagcgtgttcgacgacttataa
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