Escherichia coli K-12 DH10B: ECDH10B_0123
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Entry
ECDH10B_0123 CDS
T00666
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ecd
Escherichia coli K-12 DH10B
Pathway
ecd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECDH10B_0123 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecd03019
]
ECDH10B_0123 (pcnB)
Enzymes [BR:
ecd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ECDH10B_0123 (pcnB)
Messenger RNA biogenesis [BR:
ecd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ECDH10B_0123 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ACB01322
LinkDB
All DBs
Position
complement(131833..133230)
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AA seq
465 aa
AA seq
DB search
MFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRLNKAGY
EAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEV
ATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDY
VGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLND
IPPARLFEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIEQVLK
NTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSL
AIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLV
KWWGEFQVSAPPDQKGMLNELDEEPSPRRRTRRPRKRAPRREGTA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atttttacccgagtcgctaatttttgccgcaaggtgctaagccgcgaggaaagcgaggct
gaacaggcagtcgcccgtccacaggtgacggtgatcccgcgtgagcagcatgctatttcc
cgcaaagatatcagtgaaaatgccctgaaggtaatgtacaggctcaataaagcgggatac
gaagcctggctggttggcggcggcgtgcgcgacctgttacttggcaaaaagccgaaagat
tttgacgtaaccactaacgccacgcctgagcaggtgcgcaaactgttccgtaactgccgc
ctggtgggtcgccgtttccgtctggctcatgtaatgtttggcccggagattatcgaagtt
gcgaccttccgtggacaccacgaaggtaacgtcagcgaccgcacgacctcccaacgcggg
caaaacggcatgttgctgcgcgacaacattttcggctccatcgaagaagacgcccagcgc
cgcgatttcactatcaacagcctgtattacagcgtagcggattttaccgtccgtgattac
gttggcggcatgaaggatctgaaggacggcgttatccgtctgattggtaacccggaaacg
cgctaccgtgaagatccggtacgtatgctgcgcgcggtacgttttgccgccaaattgggt
atgcgcatcagcccggaaaccgcagaaccgatccctcgcctcgctaccctgctgaacgat
atcccaccggcacgcctgtttgaagaatcgcttaaactgctacaagcgggctacggttac
gaaacctataagctgttgtgtgaatatcatctgttccagccgctgttcccgaccattacc
cgctacttcacggaaaatggcgacagcccgatggagcggatcattgaacaggtgctgaag
aataccgatacgcgtatccataacgatatgcgcgtgaacccggcgttcctgtttgccgcc
atgttctggtacccactgctggagacggcacagaagatcgcccaggaaagcggcctgacc
tatcacgacgctttcgcgctggcgatgaacgacgtgctggacgaagcctgccgttcactg
gcaatcccgaaacgtctgacgacattaacccgcgatatctggcagttgcagttgcgtatg
tcccgtcgtcagggtaaacgcgcatggaaactgctggagcatcctaagttccgtgcggct
tatgacctgttggccttgcgagctgaagttgagcgtaacgctgaactgcagcgtctggtg
aaatggtggggtgagttccaggtttccgcgccaccagaccaaaaagggatgctcaacgag
ctggatgaagaaccgtcaccgcgtcgtcgtactcgtcgtccacgcaaacgcgcaccacgt
cgtgagggtaccgcatga
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