Escherichia coli K-12 DH10B: ECDH10B_1953
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Entry
ECDH10B_1953 CDS
T00666
Symbol
yoaD
Name
(GenBank) predicted phosphodiesterase
KO
K21090
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ecd
Escherichia coli K-12 DH10B
Pathway
ecd02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECDH10B_1953 (yoaD)
Enzymes [BR:
ecd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
ECDH10B_1953 (yoaD)
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Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
MSC
Motif
Other DBs
NCBI-ProteinID:
ACB03012
LinkDB
All DBs
Position
1987022..1988620
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AA seq
532 aa
AA seq
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MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV
LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV
VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ
LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY
LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV
EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA
PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG
TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE
QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagcacaacggatcattaaaacctatcgtcgtaatcgaatgattgtttgtacg
atttgcgcactcgttacgctcgcttcgaccctgagcgtgcgatttatttcacagcgtaac
ttaaatcaacaacgggtagtacaattcgccaatcacgctgtagaggaattagataaagta
ctgcttcccctacaggcaggtagcgaagtcttgcttccgctgattggtctgccctgctct
gtcgcccatttgccattacgtaaacaggcggcaaaactccaaactgtgcgatccattggc
ctggtgcaagacggcacactttattgctccagcatttttggttatcgcaatgtgcccgtc
gtggacattctggctgaacttcctgcaccgcaaccacttttacgcctgacgatcgaccgt
gccctgattaaaggcagtccggttttgattcaatggacgcctgcagcgggcagtagcaat
gctggggtcatggagatgattaacatcgacttactgacggcaatgctgcttgagccacaa
ctgccgcaaatcagtagcgccagcctgacggtggacaaacggcatttgctctatggtaat
gggctggtagattcccttccgcaacctgaagacaatgaaaactatcaggtttcttcgcaa
cgctttccttttaccattaacgttaatggtccgggggctacggcgctggcatggcactat
cttccaacacaattaccgctggcggtgctgctaagtttactggtgggctacatcgcctgg
ctggcgaccgcttaccgaatgagcttttcccgcgaaatcaatctgggcctggcgcaacat
gagttcgaattgttctgtcagcctttgcttaatgcgcgcagccagcaatgtattggtgta
gagattttgctgcgctggaacaatccgcgtcagggctggatttcaccggatgtgtttatt
cctatcgcggaagaacatcatttaattgtgccactgacccgctatgtgatggcagaaacc
attcgtcagcgccatgttttcccgatgagtagtcagtttcatgttggcattaacgtcgca
cccagccattttcgccgtggtgtgctgataaaagatctcaatcagtactggtttagcgct
cacccgattcagcaactgatcctcgaaatcaccgaacgcgatgccttactggatgttgat
tatcggattgcccgcgagctgcatcgtaaaaacgtcaaactggcgattgatgacttcggc
accggcaacagctcgttttcctggcttgaaacattacgtcctgacgtgctgaaaattgat
aagtcatttaccgcagctataggttctgacgcggttaactcgacggtgaccgatatcatc
atcgcgctggggcaaagactgaatattgaactggtggcggagggcgtggaaacgcaagaa
caggcgaagtatttgcgccgtcatggcgtgcatattttgcaagggtatttgtacgcacag
ccgatgccgctacgtgattttcccaaatggctggcgggcagccaaccgccgcccgcccgg
cataatggacatatcacgcccattatgccgttacgttaa
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