Escherichia coli K-12 DH10B: ECDH10B_3125
Help
Entry
ECDH10B_3125 CDS
T00666
Symbol
yggR
Name
(GenBank) predicted transporter
KO
K02669
twitching motility protein PilT
Organism
ecd
Escherichia coli K-12 DH10B
Brite
KEGG Orthology (KO) [BR:
ecd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ecd02044
]
ECDH10B_3125 (yggR)
02035 Bacterial motility proteins [BR:
ecd02035
]
ECDH10B_3125 (yggR)
Secretion system [BR:
ecd02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
ECDH10B_3125 (yggR)
Type IVa pilus homolog protein
ECDH10B_3125 (yggR)
Bacterial motility proteins [BR:
ecd02035
]
Pilus system
Twitching motility proteins
ECDH10B_3125 (yggR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
AAA_22
nSTAND_NTPase5
AAA_29
AAA_14
AAA_16
FtsK_SpoIIIE
AAA_30
AAA_23
DUF87
TrwB_AAD_bind
ABC_tran
NPHP3_N
AAA_19
nSTAND3
ResIII
SRP54
Zeta_toxin
AAA_33
SLFN-g3_helicase
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ACB04044
LinkDB
All DBs
Position
complement(3187191..3188171)
Genome browser
AA seq
326 aa
AA seq
DB search
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAIL
LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN
GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM
TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPH
VIQTGQQVGMITFQQSYQHRVGEGRL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggaagaaattgtggcccttagtgtaaagcataacgtctcggatctacacctg
tgcagcgcctggcccgcacgatggcgcattcgcggcagaatggaagctgcgccgtttgat
acgccggacgtcgaagagctactgcgggagtggctggatgacgatcagcgggcaatattg
ctggagaatggtcagctggattttgccgtgtcgctggcggaaaaccagcgattgcgtggc
agcgcattcgcgcaacggcatggcatttcgctggcgttacggctgttaccttcgcactgc
ccgcagctcgaacagcttggcgcaccaacggtattgccggaattactcaagagcgagaat
ggcctgattctggtgacgggggcgacggggagtggcaaatctaccacgctggcggcgatg
gttggctatctcaatcaacatgccgatgcgcatattctgacgctggaagatcctgttgaa
tatctctatgccagccagcgatgtttgatccagcagcgggaaattggtttgcactgtatg
acgttcgcatcgggattgcgggccgcattgcgggaagatcctgatgtgattttgctcgga
gagctgcgtgacagcgagacaatccgtctggcactgacggcggcagaaaccgggcatttg
gtgctggcaacattacatacgcgtggtgccgcgcaggcagttgagcgactggtggattca
tttccggcgcaggaaaaagaccccgtgcgtaatcaactggcaggtagtttacgggcagtg
ctgtcacaaaagctggaagtggataaacaggaaggacgcgtggcgctatttgaattgctg
attaacacacccgcggtggggaatttgattcgcgaagggaaaacccaccagttaccgcat
gttattcaaaccgggcagcaggtggggatgataacgtttcagcagagttatcagcaccgg
gtgggggaagggcgtttgtga
DBGET
integrated database retrieval system
