Escherichia coli K-12 DH10B: ECDH10B_3797
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Entry
ECDH10B_3797 CDS
T00666
Symbol
yibD
Name
(GenBank) predicted glycosyl transferase
KO
K19354
heptose III glucuronosyltransferase [EC:2.4.1.-]
Organism
ecd
Escherichia coli K-12 DH10B
Pathway
ecd00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ECDH10B_3797 (yibD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecd01005
]
ECDH10B_3797 (yibD)
Lipopolysaccharide biosynthesis proteins [BR:
ecd01005
]
Core region
ECDH10B_3797 (yibD)
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Ortholog
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Gene cluster
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Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glyco_tranf_2_4
Motif
Other DBs
NCBI-ProteinID:
ACB04665
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Position
complement(3884647..3885681)
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AA seq
344 aa
AA seq
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MMNSTNKLSVIIPLYNAGDDFRTCMESLITQTWTALEIIIINDGSTDNSVEIAKYYAENY
PHVRLLHQANAGASVARNRGIEVATGKYVAFVDADDEVYPTMYETLMTMALEDDLDVAQC
NADWCFRETGETWQSIPTDRLRSTGVLTGPDWLRMGLSSRRWTHVVWMGVYRRDVIVKNN
IKFIAGLHHQDIVWTTEFMFNALRARYTEQSLYKYYLHNTSVSRLHRQGNKNLNYQRHYI
KITRLLEKLNRNYADKIMIYPEFHQQITYEALRVCHAVRKEPDILTRQRMIAEIFTSGMY
KRLITNVRSVKVGYQALLWSFRLWQWRDKTRSHHRITRSAFNLR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacagcaccaataaacttagtgttattattccgttatataatgcgggcgatgat
ttccgcacttgtatggaatctttaattacgcaaacctggactgctctggaaatcattatt
attaacgatggttcaacggataattctgttgaaatagcaaagtattacgcagaaaactat
ccgcacgttcgtttgttgcatcaggcgaatgctggcgcatcggtggcgcgtaatcgtggg
attgaagtggcaacgggcaaatatgtcgcttttgtcgatgctgacgatgaagtctatccc
accatgtacgaaacgctgatgaccatggcgttagaggacgacctcgacgtggcgcagtgc
aacgctgactggtgttttcgtgaaacgggagaaacctggcaatccatccccaccgatcgc
cttcgctcaaccggcgtattaaccggcccggactggctgcggatggggctttcttcgcgc
cgttggactcacgttgtctggatgggggtttatcgccgtgatgttattgttaaaaataac
attaaatttattgccggattacatcatcaggatattgtctggacaacagaattcatgttt
aacgcgctgcgtgcgcgatataccgagcaatcattatataaatattatctgcataatacg
tcagtgagtcggttgcatagacaagggaataaaaaccttaattatcaacgtcactatatt
aagattacccgcctgctggagaaattaaatcgaaattatgccgacaaaattatgatttat
ccggaatttcatcagcaaataacttacgaggcattgcgtgtttgccatgcggtgcgcaaa
gagccggatattcttacccgccaacggatgattgccgagatatttacttccggtatgtat
aagcgcctgattaccaatgtgcgcagcgtgaaggtcggttaccaggcgttactgtggtct
ttccgcttatggcaatggcgcgacaaaacgcggtcgcaccatcgcattacgcgtagcgcc
tttaatttgcgctag
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