Escherichia coli K-12 DH10B: ECDH10B_3810
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Entry
ECDH10B_3810 CDS
T00666
Symbol
rfaB
Name
(GenBank) UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase
KO
K02840
UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-]
Organism
ecd
Escherichia coli K-12 DH10B
Pathway
ecd00540
Lipopolysaccharide biosynthesis
ecd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ECDH10B_3810 (rfaB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecd01005
]
ECDH10B_3810 (rfaB)
Lipopolysaccharide biosynthesis proteins [BR:
ecd01005
]
Core region
ECDH10B_3810 (rfaB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
GT4-conflict
MGDG_synth
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
ACB04678
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Position
complement(3898658..3899767)
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AA seq
369 aa
AA seq
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MSFTQLMRVSMKIAFIGEAVSGFGGMETVIRDVITTFRQQHIQSEMFFFCRNDKMDKGWL
EGIKYSCSFSNIRLGFLRRAKHIHALSKWLQEYQPDIVICIDVISCLFAAKARKKSGIDM
PVFSWPHFSLDHKKHAEYITCADYHLAISSGIKQQMINRGVAESTINVIFNPVETKDSVI
PAPEEGETATFIYVGRMKFEGQKRVKDLLDGLSQAKGNWKLHVLGDGSDFEKCQAYGREL
NIDDRIVWYGWQQYPWELVQQDIEKVSALLLTSSFEGFPMTLLEALSWGIPCISADCVSG
PADIIQPDVNGHLYQPGDIAGFVTLLNKYIAGEIHIEHEKIPASIDEFYQSKYYDRLHKV
IISAISRRK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
gtgagttttactcaattaatgagagtttctatgaaaatagcgtttatcggcgaagctgtt
tctggatttggcggcatggaaactgtcatccgtgatgttattactaccttcaggcaacaa
catatccaaagtgaaatgtttttcttttgtcgtaatgacaaaatggataagggatggctg
gaaggtattaaatactcatgttcattttccaatattcgtttaggttttttgcgtcgggcg
aaacatattcatgctctaagtaaatggcttcaggagtaccaaccagatatcgttatttgt
attgatgtgatctcctgcctgtttgccgcaaaagcacgtaaaaaatcaggaattgatatg
ccagtattttcatggccacatttttctttagatcacaaaaaacatgctgaatatatcacc
tgtgccgactatcatttagcaatcagctctggcattaaacagcaaatgattaatcgaggt
gtagcagaatcgacgataaatgttatttttaatcccgtcgaaactaaagactcagtcatt
cccgcgcccgaggaaggtgaaacggcaacgtttatttatgttgggcgtatgaaatttgaa
ggccagaaaagagttaaagacctgcttgatggcttatcacaagcgaaaggtaactggaaa
ctccatgtattgggtgatggctccgatttcgaaaaatgccaggcttatggtagagaatta
aatattgatgatcgaattgtctggtatggttggcaacaatatccctgggaattggtccag
caagatattgaaaaagtgagtgcgttattgctcacgtcatcttttgaaggtttcccaatg
accctacttgaagccttgtcgtgggggattccttgtatcagtgccgattgtgtctccggg
cctgctgacattattcaacctgatgtcaatggccatctgtatcaaccgggagatattgct
ggttttgtaactcttctaaataaatatatagcaggtgaaattcatatcgaacatgaaaaa
attcctgcgtcgatcgatgaattttaccaatcgaagtattacgatagattacataaggta
attatttctgctatttcccggaggaaataa
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