Escherichia coli K-12 DH10B: ECDH10B_3893
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Entry
ECDH10B_3893 CDS
T00666
Symbol
trmE
Name
(GenBank) GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ecd
Escherichia coli K-12 DH10B
Brite
KEGG Orthology (KO) [BR:
ecd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecd03016
]
ECDH10B_3893 (trmE)
Transfer RNA biogenesis [BR:
ecd03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ECDH10B_3893 (trmE)
Prokaryotic type
Methyltransferases
ECDH10B_3893 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
RsgA_GTPase
AIG1
ABC_tran
Roc
Arf
AAA_28
SRPRB
Gtr1_RagA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ACB04750
UniProt:
B1X9T5
LinkDB
All DBs
Position
3982435..3983799
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AA seq
454 aa
AA seq
DB search
MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPKPRYADYLPFKDADGSVLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGMSEVNGHALIRLSAR
TGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLA
EELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatgacactatcgtagcccaggccacgcctccgggacgtggcggcgttggc
atcctgcgcatctccggcttcaaagcccgtgaagttgccgaaaccgtgctgggtaaactg
cctaagccgcgctacgccgattatcttccgtttaaagacgccgacggcagcgtgctcgat
caggggattgcgctatggttccctggcccgaactcgttcaccggcgaagatgtgctggaa
ctgcaaggtcatggcggtccggtgatcctcgacctgctgttaaaacgcattctgaccatt
cccggcctgcggattgctcgccctggtgagttttccgaacgcgcgtttcttaacgataaa
cttgacttagcccaggccgaggcgattgccgatcttatcgacgccagttcggaacaggcg
gcccgttcggcacttaactcgctgcaaggcgcattctccgcacgggttaatcatctggta
gaagccctcacccacttgcgcatttacgtcgaagcggcaattgatttccccgatgaagag
atcgatttcctctccgacggaaaaattgaagcccagctcaatgacgttattgccgatctt
gatgcagtgcgtgctgaagcacgtcagggtagtttgttgcgcgaagggatgaaagtggtg
attgccggacgtcctaacgccggtaaatcgagcctgttaaacgcgctggcggggcgtgaa
gcggcaatcgtaaccgatatcgccggaactacgcgtgacgtgctgcgtgagcatatccac
attgacggaatgccgctgcatatcatcgataccgccgggctacgtgaagccagtgacgaa
gtagaacgtattggtatcgagcgcgcgtggcaggaaattgaacaggccgaccgcgtgctg
tttatggtcgatggcaccacaacagacgccgtggatccggcagagatctggccggaattt
attgcccgtctgccagcgaaactgccgatcaccgtggtgcgcaataaagccgatatcacc
ggcgaaacgctgggaatgagtgaagtgaacggtcacgcgttaattcgtctctcggcaagg
actggtgaaggcgtggacgtgctgcgtaaccatctcaaacagagcatgggctttgacacc
aacatggaaggcggcttcctggcgcgtcgtcgccacctacaggcgctggaacaggcagcg
gaacatctacaacagggcaaagcgcaactgttgggagcctgggcaggtgaactgctggcg
gaagagttgcgtctggcacagcagaacttaagcgaaatcaccggggaatttacttcagac
gacctgctggggcggattttctccagcttctgtattggtaagtaa
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