Escherichia coli O157 H7 EDL933 (EHEC): Z0066
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Entry
Z0066 CDS
T00044
Symbol
yabO
Name
(GenBank) orf, hypothetical protein
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
ece
Escherichia coli O157:H7 EDL933 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ece00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ece03009
]
Z0066 (yabO)
03016 Transfer RNA biogenesis [BR:
ece03016
]
Z0066 (yabO)
Enzymes [BR:
ece01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
Z0066 (yabO)
5.4.99.29 23S rRNA pseudouridine746 synthase
Z0066 (yabO)
Ribosome biogenesis [BR:
ece03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Z0066 (yabO)
Transfer RNA biogenesis [BR:
ece03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Z0066 (yabO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AAG54362
UniProt:
Q8XA10
LinkDB
All DBs
Position
complement(64620..65279)
Genome browser
AA seq
219 aa
AA seq
DB search
MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESV
HRLDMATSGVIVVALTKAAERELKRQFRERVPKKQYVTRVWGHPSPAEGLVDLPLICDWP
NRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRF
YASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggggatggaaaactacaatccaccgcaggaaccctggttggttatcctgtatcaggat
gaccatattatggtggtcaacaagccgagcggtttgttgtctgtgccgggtcgtctggaa
gagcacaaagacagcgtgatgacgcgcattcagcgagattatccgcaggcagaatcggtg
catcgtctggatatggctaccagcggcgtgattgtagtggcgctgaccaaagccgcggag
cgggagttaaaacgccagttccgcgagcgcgtgccgaaaaagcagtatgtgacccgcgtc
tgggggcatccatcccccgcagaaggtctggtggatctgccgctgatttgcgactggcca
aaccgcccgaaacagaaagtctgttacgaaacgggtaaacctgcgcagacggaatatgaa
gtggtggagtatgcggcggataacacggcaagagtggtgttaaaaccgattaccgggcgt
tcgcatcaattgcgtgtgcatatgctggcgctggggcatccgattctcggcgatcgtttt
tatgcatcaccagaagcgagagcgatggcaccgcgtttgttgctacatgcagagatgttg
acgattacccatccggcgtatggcaatagtatgacgtttaaagcgccagcggatttttaa
DBGET
integrated database retrieval system
