Escherichia coli O157 H7 EDL933 (EHEC): Z0235
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Entry
Z0235 CDS
T00044
Symbol
dniR
Name
(GenBank) transcriptional regulator for nitrite reductase (cytochrome c552)
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ece
Escherichia coli O157:H7 EDL933 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ece00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ece01011
]
Z0235 (dniR)
Enzymes [BR:
ece01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Z0235 (dniR)
Peptidoglycan biosynthesis and degradation proteins [BR:
ece01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Z0235 (dniR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM_RLK
LysM3_LYK4_5
NMB0315_dom_I
LysM1_NFP_LYK
HTH_Tnp_1
LysM_OapA
Motif
Other DBs
NCBI-ProteinID:
AAG54507
UniProt:
A0A9Q6ZLD3
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All DBs
Position
complement(236148..237506)
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AA seq
452 aa
AA seq
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MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQARWMDDGTSIAPDGDLW
AFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPMELVL
LPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALNMMQRL
NKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQETKQYVPKMLALSDI
LKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLKTFNAGVKGSTLGAS
GPQYVMVPKKHADQLRESLASGEIAAVQSTLVADNTPLNSRVYTVRSGDTLSSIASRLGV
STKDLQQWNKLRGSKLKPGQSLTIGAGSSAQRLANNSDSITYRVRKGDSLSSIAKRHGVN
IKDVMRWNSDTANLQPGDKLTLFVKNNSMPDS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaaagcgatattactcgcctctgtcctgctcgtgggttgccagagtaccggc
aacgttcaacagcacgcacagagcctttctgcagctggtcaaggggaagcagcaaagttt
acaagtcaggcacgatggatggacgatgggacgtctatcgcgccagatggtgacttgtgg
gctttcattggcgacgagctaaagatgggaattccggaaaatgaccggattcgcgaacag
aaacagaaatatttacgcaataagagctatctccacgatgtaactttacgggcagagccg
tatatgtactggatagccgggcaagttaaaaaacgtaacatgcctatggaactggtacta
ctacccatagtggagagcgcttttgatcctcacgcaacgtctggcgccaatgccgcaggc
atctggcagatcattccgagcacggggcgcaattatggtttgaaacagacccgcaattat
gacgcgcgtcgcgatgttgttgcttcaacaactgccgcgctgaatatgatgcagcgtctg
aacaaaatgtttgatggcgactggcttctgaccgtagcggcttataacagcggcgaaggt
cgggtcatgaaggcaattaaaacgaacaaagcgcgtgggaaatccacggacttctggtcg
ttaccgttgccgcaggaaacgaagcagtacgtgcctaaaatgctggcattgagtgatatt
ctcaaaaacagcaagcgttatggcgtacgtctgccaacgaccgatgaaagccgtgctctg
gcgcgtgtgcacctgagtagcccggttgaaatggcgaaggttgcagatatggcggggatt
tccgtcagcaagctgaagacattcaacgctggcgtgaaaggctccacgctgggcgcaagt
ggtccgcagtacgtgatggtgccaaagaagcatgcagatcaactgcgtgaatctctggct
tcaggcgaaattgctgctgtacagtcgacgctggttgccgacaatacgccgcttaacagc
cgtgtttacaccgtacgctctggcgacacgctttcaagtatcgcttcacgtctcggcgta
agcaccaaagatttgcagcagtggaacaaactgcgcggctctaagctgaaaccaggccaa
agtctgacgattggcgcaggtagtagcgcacagcggttggcaaacaacagcgatagcatt
acgtatcgtgtgcgcaaaggcgattcgctttcaagcattgctaaacgccacggcgtgaac
atcaaagatgtgatgcgctggaacagcgatactgcgaatctgcaaccaggcgataagctg
acgttgtttgtgaaaaacaacagcatgccagactcctga
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