KEGG   Escherichia coli O157 H7 EDL933 (EHEC): Z1313
Entry
Z1313             CDS       T00044                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
ece  Escherichia coli O157:H7 EDL933 (EHEC)
Brite
KEGG Orthology (KO) [BR:ece00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ece03400]
    Z1313 (helD)
Enzymes [BR:ece01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Z1313 (helD)
DNA repair and recombination proteins [BR:ece03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Z1313 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 Viral_helicase1 DEAD
Other DBs
NCBI-ProteinID: AAG55448
UniProt: A0A9Q6ZEY5
LinkDB
Position
1243165..1245219
AA seq 684 aa
MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV
LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL
TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA
MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS
PEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT
AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV
SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV
ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM
SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL
LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ
QADYVLIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL
FNKENPSPFVEILKNLDVPVARKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaactgaaagcgacaacgcttggaaaacgtctggcacagcacccttacgatcgggcg
gtgatcctcaatgccgggattaaagtctccggcgatcgccacgaataccttattcctttc
aatcaattactggcgattcactgtaagcgcggtctggtatggggcgagctggaatttgta
ctgccggacgaaaaagtggtgcgtctgcacggtaccgaatggggcgagacgcagcgtttt
taccatcatcttgatgctcactggcggcggtggagtggcgagatgagcgaaattgcgtct
ggtgttttacgccagcaactggatttgattgccacgcgcactggagaaaataaatggctg
acgcgtgagcaaacctctggcgttcagcaacaaatccgccaggctttgtcggcgttgccg
ttgccggttaaccgactggaagaattcgataactgccgtgaggcgtggcgtaaatgtcag
gcctggttgaaagatattgaaagcgctcggttgcagcataaccaggcgtataccgaagcc
atgcttaccgagtatgcggattttttccgccaggtcgagtcttcaccgctgaatccggcg
caggcccgggcagtcgttaatggcgagcattctctgttagtgctggcaggtgcaggaagc
ggaaaaacgtcggtgctggtggcccgtgcaggctggttgctggcgcgtggtgaagcgtcc
cctgagcaaattttattgctggcgtttggtcgcaaagccgctgaagagatggacgagcgt
attcgcgaacggctacataccgaagacattaccgcacgcacgtttcatgcgctggcgctg
catattattcagcagggcagcaaaaaagttccgatagtcagcaaactggaaaatgatacc
gctgcccgtcatgaactctttattgctgagtggcgcaagcaatgcagcgaaaagaaagcg
caggcgaagggctggcggcaatggctgacggaagaaatgcagtggtcagtgccagaaggt
aacttctgggatgatgaaaaattacagcgtcgtcttgcctcacgcctcgatcgttgggta
agtctgatgcggatgcacggtggtgcacaggcagaaatgattgccagtgcacccgaagag
attcgcgatctgttcagtaaacgtatcaagttgatggccccgttattaaaagcctggaaa
ggtgcgctgaaggcagaaaacgctgtcgatttttcgggccttattcatcaggcgattgtg
attctggagaaaggtcgctttatcagcccgtggaagcatattctggttgatgaatttcag
gatatctcgccgcagcgggcagcgttgttagcggcattacgcaagcaaaacagtcagacg
acgttgttcgccgttggtgatgactggcaggcgatttaccgattcagcggtgcgcaaatg
tcgctcaccaccgctttccatgaaaactttggtgaaggcgaacgctgtgatttagacacg
acttaccgttttaacagtcgtatcggtgaggtggcaaaccggtttattcagcagaaccca
ggccagctgaaaaagccgctaaacagcttaaccaatggagacaaaaaagccgtcacgtta
ttggatgagagtcaacttgacgctttgctggataagctctctggttatgccaaaccggaa
gagcgcattctgatcctggcgcgttaccatcacatgaggcctgccagcctggaaaaagcg
gcaacacgctggccgaagttgcaaatcgactttatgaccattcatgccagcaaagggcaa
caggcggattacgtcctcatcgttggcttgcaggagggaagtgatggttttccggctgcg
gcgcgggagtcgattatggaagaggcgctactgccaccggttgaggatttcccggacgct
gaagaacggcggttaatgtacgtggcgctgacccgggcacgtcatcgggtatgggcactg
tttaacaaagagaatccctctccctttgtggaaatactgaaaaatctggatgtgccggtg
gcgagaaaaccgtaa

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