KEGG   Escherichia coli O157 H7 EDL933 (EHEC): Z1525
Entry
Z1525             CDS       T00044                                 
Symbol
ycdR
Name
(GenBank) orf, hypothetical protein
  KO
K11931  poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
ece  Escherichia coli O157:H7 EDL933 (EHEC)
Pathway
ece02026  Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:ece00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02026 Biofilm formation - Escherichia coli
    Z1525 (ycdR)
SSDB
Motif
Pfam: GHL13 Polysacc_deac_1 GHL10
Other DBs
NCBI-ProteinID: AAG55641
UniProt: Q8XAR3
LinkDB
Position
complement(1414562..1416580)
AA seq 672 aa
MLRNGNKYLLMLVSIIMLTACISQSRTSFIPPQDRKSLLAEQPWPHNGFVAISWHNVEDE
AADQRFMSVRTSALREQFAWLRENGYQPVSIAQIREAHRGGKPLPEKAVVLTFDDGYQSF
YTRVFPILQAFQWPAVWAPVGSWVDTPADKQVKFGDELVDREYFATWQQVREVARSRLVE
LASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTK
VEVNPHVFIWPYGEANGIAIEELKKLGYDMFFTLESGLANASQLDSIPRVLIANNPSLKE
FAQQIITVQEKSPQRIMHIDLDYVYDENLQQMDRNIDVLIQRVKDMQISTVYLQAFADPD
GDGLVKEVWFPNRLLPMKADIFSRVAWQLRTRSGVNIYAWMPVLSWDLDPTLTRVKYLPT
GEKKAQIHPEQYHRLSPFDDRVRAQVGMLYEDLAGHAAFDGILFHDDALLSDYEDASAPA
ITAYQQAGFSGSLSEIRQNPEQFKQWARFKSRALTDFTLELSARVKAIRGPHIKTARNIF
ALPVIQPESEAWFAQNYADFLKSYDWTAIMAMPYLEGVAEKSADQWLIQLTNQIKNIPQA
KDKSILELQAQNWQKNGQHQAISSQQLAHWMSLLQLNGVKNYGYYPDNFLHNQPEIDLIR
PEFSTAWYPKND
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgttacgtaatggaaataaatatctcctgatgctggtgagtataattatgctcaccgcg
tgcattagccagtcaagaacatcatttataccgccacaggatcgcaaatctttactcgcc
gagcaaccgtggccgcataatggttttgtagcgatttcatggcataacgttgaagacgaa
gctgccgaccagcgttttatgtcagtgcggacatcagcactgcgtgaacaatttgcctgg
ctgcgcgagaacggttatcaaccggtcagtattgctcaaattcgtgaagcacatcgagga
ggaaaaccgctaccggaaaaagctgtagtgctgacttttgatgacggctaccagagtttt
tatacccgcgtcttcccaattcttcaggccttccagtggcctgctgtatgggcccccgtc
ggcagttgggtcgatacgccagcggataaacaagtaaaatttggcgatgagttggtcgat
cgagaatattttgccacgtggcaacaagtgcgagaagttgcgcgttcccggctcgttgag
ctcgcttctcatacatggaattctcactacggtattcaggctaatgccaccggcagctta
ttgcctgtatatgtaaatcgtgcatattttactgaccacgcacggtatgaaaccgcagca
gaataccgggaaagaattcgtctggatgctgtaaaaatgacggaatacctgcgtacaaag
gttgaggtaaatccacacgtttttatttggccttatggcgaagcgaatggcatagcgata
gaggaattaaaaaaactcggttatgacatgttcttcacccttgaatcaggtttggcaaat
gcgtcgcaattggattccattccgcgggtattaatcgccaataatccctcattaaaagag
tttgcccagcaaattattaccgtacaggaaaaatcaccacaacggataatgcatatcgat
cttgattacgtttatgacgaaaacctccagcaaatggatcgcaatattgatgtgctaatt
cagcgggtgaaagatatgcaaatatcaaccgtgtatttgcaggcatttgctgatcccgat
ggtgatgggctggtcaaagaggtctggtttccaaatcgtttgctaccaatgaaagcagat
atttttagtcgggttgcctggcaattacgtacccgctcaggtgtaaacatctatgcgtgg
atgccggtattaagctgggatttagatcccacattaacgcgagtaaaatacttaccaaca
ggggagaaaaaagcacaaattcatcctgaacaatatcaccgtctctctcctttcgatgac
agagtcagagcacaagttggcatgttatatgaagatcttgccggacatgctgcttttgat
ggcatattgttccacgatgatgctttgctttcagattatgaagatgccagtgcaccggct
atcacggcttatcagcaagcaggctttagcgggagtctgagcgaaattcgacaaaacccg
gagcaatttaaacagtgggcccgctttaaaagtcgtgcgttaactgacttcactttagaa
cttagtgcgcgcgtaaaagccattcgcggtccacatattaaaactgcacgaaatattttt
gcacttccggtaatacaacctgaaagtgaagcctggtttgcacagaattatgctgatttc
ctaaaaagctatgactggaccgctattatggctatgccttatctggaaggtgtcgcagaa
aaatcggctgaccaatggttaatacaattgaccaatcaaattaaaaacatccctcaggct
aaagacaaatctattttagaattacaggcacaaaactggcagaaaaatggtcagcatcag
gctatttcttcgcaacaactcgctcactggatgagcctattacaactgaatggagtgaaa
aactatggttattatcccgacaattttctgcataaccaacctgaaatagaccttattcgt
cctgagttttcaacagcctggtatccgaaaaatgattaa

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