Escherichia coli O157 H7 EDL933 (EHEC): Z3838
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Entry
Z3838 CDS
T00044
Symbol
yfhD
Name
(GenBank) putative periplasmic binding transport protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
ece
Escherichia coli O157:H7 EDL933 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ece00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ece01011
]
Z3838 (yfhD)
Enzymes [BR:
ece01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Z3838 (yfhD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ece01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Z3838 (yfhD)
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
AAG57672
UniProt:
Q8XA45
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All DBs
Position
3486160..3487578
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AA seq
472 aa
AA seq
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MSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLA
AGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQT
LKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDE
QPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDA
VLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDR
TDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHMQDARALTAKTKGNPD
SWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAA
MQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLFSRKGSEEKQN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccattcatactcccctgacgtataacgaaatcaacgggaaaccttttggcctg
gattacgaactggcgaaacagtttgccgattacctcggcgtaaaactgaaagtgaccgtg
cggcagaatatcagccagctgtttgacgacctcgataatggtaacgccgacctgctggcg
gcaggacttgtctataacagtgagcgggtaaaaaattatcagcctggccctacctattat
tccgtgtcacaacaactggtttataaagtgggtcagtatcgcccacgtacgctgggcaac
ctgacggcggagcaactcaccgttgcaccgggtcatgtggtggttaacgatctccagacc
ctgaaagaaacaaaattcccggaattaagctggaaggtagacgacaaaaaaggctctgcg
gaattaatggaagatgtcatcgaaggaaaactcgattacaccattgctgattctgtcgcc
atcagcctgtttcagcgcgttcacccggagctcgccgtagcgctcgatatcaccgatgaa
caaccggtgacctggtttagcccgttagatggcgataataccctttccgccgccctgctc
gacttcttcaacgaaatgaatgaagacggtacgctggcacgcattgaagagaaatacctg
gggcatggcgatgattttgattacgtcgatacgcgcacatttttacgcgccgtcgatgcg
gtactgccgcagttaaagcccctgtttgagaaatacgccgaagaaattgactggcgtttg
ctggccgctattgcttatcaggaatcgcactgggatgcacaggccacttcaccgacgggt
gtgcgcggcatgatgatgttaaccaaaaataccgcgcaaagcctcggcattacggatcgt
accgatgccgaacagagcatcagcggtggcgtgcgttatttgcaggatatgatgagtaaa
gtgccggaaagtgtgccggagaacgagcggatctggtttgccctcgctgcgtacaatatg
ggctatgcgcatatgcaggatgcccgcgccctgacggcaaaaaccaaagggaatcctgac
agttgggctgacgtaaaacagcgtctgcctttacttagccagaaaccctattacagcaag
ctgacttacggctacgctcgtgggcatgaagcctacgcttatgtcgaaaatattcgtaag
tatcagattagcctggtgggttatctgcaagagaaagagaagcaggctacagaagcggcg
atgcaactggcgcaggattatccggcggtatcgcctacggagttgggcaaagagaaattt
ccttttctctcgtttctttcccagtcgtcatcaaactatttgacccattctccctctctg
ctgttttccaggaaagggagtgaagagaaacaaaattaa
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