Escherichia coli O157 H7 EDL933 (EHEC): Z3959
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Entry
Z3959 CDS
T00044
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase, NADP-dependent activity
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ece
Escherichia coli O157:H7 EDL933 (EHEC)
Pathway
ece00250
Alanine, aspartate and glutamate metabolism
ece00310
Lysine degradation
ece00350
Tyrosine metabolism
ece00650
Butanoate metabolism
ece00760
Nicotinate and nicotinamide metabolism
ece01100
Metabolic pathways
ece01120
Microbial metabolism in diverse environments
Module
ece_M00027
GABA (gamma-Aminobutyrate) shunt
ece_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ece00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Z3959 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Z3959 (gabD)
00310 Lysine degradation
Z3959 (gabD)
00350 Tyrosine metabolism
Z3959 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
Z3959 (gabD)
Enzymes [BR:
ece01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
Z3959 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
Z3959 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
Z3959 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AAG57768
UniProt:
A0A9Q6ZJ00
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All DBs
Position
3580750..3582198
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AA seq
482 aa
AA seq
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MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRA
LPVWRALTAKERANILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYDRFAEKLQQAVSKLHIGDGLDKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA
HERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaacgacagtaacttattccgccagcaggcgttgattaacggggaatggctg
gacgccaacaatggtgaagtcatcgacgtcaccaatccggcgaacggcgacaagctgggt
agcgtgccgaaaatgggcgctgatgaaactcgcgccgctatcgacgccgccaaccgcgcc
ctgcccgtctggcgtgcgctcaccgccaaagaacgcgccaacattctgcgcaactggttc
aatttgatgatggagcatcaggacgatttagcgcgcctgatgaccctcgaacagggtaaa
ccgctggctgaagcgaaaggcgaaatcagctacgccgcctcttttattgagtggtttgcc
gaagaaggcaaacgcatttatggcgacaccattcccggtcatcaggccgataagcgcctg
attgtgatcaagcagccgattggcgttacagcggccatcacgccgtggaactttccggcg
gcaatgattacccgcaaagccggtccggcgctggcggcaggctgcaccatggtgctgaag
cccgccagtcagacgccgttctctgcgctggcgctggcggagctggcgatccgcgcgggc
attccggctggcgtgtttaacgtggtcaccggttcggcgggcgcggtgggtaatgaactg
accagcaacccgctggtacgcaaactgtcgtttaccggctcgaccgaaattggccgccag
ttaatggaacagtgcgcgaaagacatcaaaaaagtgtcgctggagctgggcggcaacgcg
ccgtttatcgtctttgacgatgccgatctcgataaagccgtggaaggcgcactggcctcg
aaattccgcaacgccgggcaaacctgcgtctgcgccaaccgtttatacgtgcaggacggc
gtgtatgaccgctttgccgaaaaattgcagcaggcggtgagcaaactgcatatcggcgac
gggctggataaaggcgtcaccatcgggccgctgatcgatgaaaaagcggtagcaaaagtg
gaagagcatattgccgatgcgctggaaaaaggcgcgcgcgtagtttgcggcggtaaagca
catgaacgcggcggcaacttcttccagcccaccattctggtggacgtgccggccaacgcc
aaagtgtcgaaagaagagaccttcggccccctcgccccgctgttccgttttaaagatgaa
gccgatgtgatcgcgcaagccaatgacaccgagtttggccttgccgcctatttytatgcc
cgtgatttaagtcgcgtcttccgcgtgggcgaggcgctggagtacggcatcgtcggcatc
aataccgggattatttccaatgaagtggccccgttcggcggcattaaagcctcgggtctg
ggtcgtgaaggttcgaagtatggcatcgaagattacttagaaatcaaatatatgtgcatc
ggtctttaa
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