Escherichia coli O157 H7 EDL933 (EHEC): Z3960
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Entry
Z3960 CDS
T00044
Symbol
gabT
Name
(GenBank) 4-aminobutyrate aminotransferase activity
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
ece
Escherichia coli O157:H7 EDL933 (EHEC)
Pathway
ece00250
Alanine, aspartate and glutamate metabolism
ece00280
Valine, leucine and isoleucine degradation
ece00310
Lysine degradation
ece00410
beta-Alanine metabolism
ece00640
Propanoate metabolism
ece00650
Butanoate metabolism
ece01100
Metabolic pathways
ece01120
Microbial metabolism in diverse environments
Module
ece_M00027
GABA (gamma-Aminobutyrate) shunt
ece_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ece00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Z3960 (gabT)
00650 Butanoate metabolism
Z3960 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Z3960 (gabT)
00280 Valine, leucine and isoleucine degradation
Z3960 (gabT)
00310 Lysine degradation
Z3960 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Z3960 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ece01007
]
Z3960 (gabT)
Enzymes [BR:
ece01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
Z3960 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
Z3960 (gabT)
2.6.1.48 5-aminovalerate transaminase
Z3960 (gabT)
Amino acid related enzymes [BR:
ece01007
]
Aminotransferase (transaminase)
Class III
Z3960 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
AP_endonuc_2
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AAG57769
UniProt:
Q8X4V9
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All DBs
Position
3582212..3583492
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AA seq
426 aa
AA seq
DB search
MSSXKELMXXRSXAIPRGVGQIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHP
KVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVK
IARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISE
DDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYAATPAFMQRLRALCDEHGIMLIADE
VQXGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAG
NPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELF
EDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQC
FAEAKQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcantaaagagttaatgcancnccgcagtnaggcaattcctcgtggcgttggg
caaattcaccccattttcgctgatcgcgcggaaaactgccgggtgtgggacgttgaaggc
cgtgagtatcttgatttcgcgggcggcattgcggtgctcaataccgggcacctgcatccg
aaagtggttgccgcggtggaagcgcagttgaaaaaactgtcgcacacctgcttccaggtg
ctggcttacgagccgtatctggagctgtgcgagattatgaatcagaaggtgccgggcgat
tttgccaagaaaacgctgctggttacgaccggttccgaagcggtggaaaacgcggtgaaa
atcgcccgcgctgccaccaaacgtagcggcaccatcgcttttagcggcgcgtatcacggg
cgcacgcattacacgctggcgctgaccggcaaggtgaatccgtactctgcgggcatgggc
ctgatgccagggcacgtttatcgcgcgctttatccttgcccactgcacggcatcagtgaa
gatgatgctatcgccagtatccaccgaatttttaaaaatgatgctgcgccggaagatatc
gccgccatcgtgattgagccggttcagggcgaaggcggtttctacgccgcgacgcctgcg
tttatgcagcgtttacgcgcgctgtgtgacgagcacgggatcatgctgattgccgatgaa
gtgcagarcggcgcggggcgtaccggcacgctgtttgcgatggagcaaatgggcgtggca
ccagatctcaccacctttgcgaaatcgatcgcaggcggcttcccactggcgggcgtcacc
gggcgcgccgaagtgatggatgccgtcgctccaggcgggctgggtggcacctatgccggt
aatccgattgcctgcgtggcggcgctggaagtgttgaaggtgttcgagcaggaaaatctg
ctgcagaaagccaacgatctggggcagaagttgaaagatggattgttggcgatcgccgaa
aaacaccctgagatcggcgacgtacgcgggctgggggcgatgatcgccatcgagctgttt
gaagacggcgatcacaacaagccggacgccaaactcaccgccgagatcgtggctcgcgcc
cgcgataaaggcctgattcttctctcctgcggcccgtattacaacgtgctgcgcatcctt
gtaccgctcaccattgaagacgctcagatccgtcagggtctggagatcatcagccagtgt
tttgctgaggcaaagcagtag
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