Escherichia coli O157 H7 EDL933 (EHEC): Z5330
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Entry
Z5330 CDS
T00044
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ece
Escherichia coli O157:H7 EDL933 (EHEC)
Pathway
ece03420
Nucleotide excision repair
ece03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ece00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Z5330 (uvrD)
03430 Mismatch repair
Z5330 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ece03400
]
Z5330 (uvrD)
Enzymes [BR:
ece01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Z5330 (uvrD)
DNA repair and recombination proteins [BR:
ece03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Z5330 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
Z5330 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AAG59006
UniProt:
A0A9Q6ZH38
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All DBs
Position
4860404..4862566
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG
TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgcgaagcggtggccgcg
ccgcgcagcaaccttctggtgctggcgggcgcgggcagtggtaagacgcgcgtactggtg
catcgtatcgcctggctgatgagcgtggaaaactgctcgccatactcgattatggctgtg
acgtttaccaacaaagcggcggcggagatgcgtcatcgtatcgggcaactgatgggcacc
agccagggcggcatgtgggtcggcaccttccacgggctggcgcaccgtttgctgcgtgcg
caccatatggacgccaatctgccgcaggatttccagatcctcgatagcgaagaccagcta
cgcctgcttaagcgtctgatcaaagccatgaacctcgacgagaagcagtggccgccgcgc
caggcaatgtggtacatcaacagccagaaagatgaaggcctgcgtccgcatcatattcaa
agctacggtaatccggtggagcagacctggcagaaggtgtatcaggcgtatcaggaagcg
tgcgatcgtgcaggcctggtggacttcgccgagctgctgctgcgcgctcacgagttgtgg
cttaacaagccgcatatcctgcaacactaccgcgaacgttttaccaacatcctggtggac
gaattccaggataccaacaacattcagtacgcgtggatccgcctgctggcgggcgacacc
ggcaaagtgatgatcgtcggtgatgacgaccagtcaatctacggctggcgcggggcgcag
gtggagaatattcagcgtttcctcaatgatttccccggtgccgaaactatccgtctggag
cagaactatcgttctaccagtaacattctgagcgccgcgaacgccctgattgaaaacaac
aacgggcgtctgggtaaaaaactgtggaccgatggcgcggacggtgagcctatttccctc
tattgcgcttttaacgaactcgatgaagcgcgttttgtcgttaaccgcatcaaaacctgg
caggacaacggtggggcgctcgccgagtgcgccattctctaccgcagcaacgcccagtcg
cgggtgctcgaagaggcgttattgcaggccagtatgccgtaccgtatttacggcgggatg
cgcttcttcgaacgccaggaaatcaaagatgcgctytcgtatctgcgcctgattgccaac
cgcaacgacgacgcggcctttgagcgtgtggtgaatacgccaacgcggggtattggtgac
cggacgctggacgtggtacgtcagacatcgcgcgatcgccagttaacactctggcaggca
tgtcgtgaactgttgcaggaaaaagccctcgccggacgtgctgccagcgccttacagcgg
tttatggaactgatcgacgccttagcgcaggaaactgccgatatgccgctgcatgtacag
actgaccgggtaattaaagactccggcctgcgtaccatgtacgagcaggagaagggcgaa
aaaggtcagacgcgtatcgaaaacttagaggaactagtgacggcaacgcgccaattcagc
tacaacgaagaagacgaagatttaatgccgctgcaggcgttcctctcccatgcggcgctg
gaagcgggcgaggggcaggcggatacctggcaggatgcagtgcagttgatgacgctgcac
tcggcgaaaggcctggagttcccgcaggtgtttatcgtcggtatggaagagggcatgttc
ccaagccagatgtcgctggatgaaggcggacgtctggaagaagaacgccgtctggcctac
gttggtgtaacccgcgcgatgcagaaactgacgctgacctacgcggaaactcgccgtctg
tatggcaaagaggtttaccatcgcccgtcgcgctttatcggtgagttgccggaagagtgt
gtggaagaggtgcgcctgcgcgccacggtaagccgcccggtcagccatcagcgtatgggt
acgccgatggtcgagaacgacagcggytacaagctcggccagcgtgtacgccacgctaag
tttggtgaaggcactatcgtcaatatggaaggcagcggcgagcatagccgtttgcaggtg
gcattccagggccagggtattaaatggctggtggcggcatacgcccggctggagacggta
taa
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integrated database retrieval system
