KEGG   Escherichia coli O157 H7 EDL933 (EHEC): Z5871
Entry
Z5871             CDS       T00044                                 
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
ece  Escherichia coli O157:H7 EDL933 (EHEC)
Pathway
ece03030  DNA replication
ece03430  Mismatch repair
ece03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ece00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Z5871 (holC)
   03430 Mismatch repair
    Z5871 (holC)
   03440 Homologous recombination
    Z5871 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ece03032]
    Z5871 (holC)
   03400 DNA repair and recombination proteins [BR:ece03400]
    Z5871 (holC)
Enzymes [BR:ece01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Z5871 (holC)
DNA replication proteins [BR:ece03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Z5871 (holC)
DNA repair and recombination proteins [BR:ece03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Z5871 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi PBP1c_linker_2
Other DBs
NCBI-ProteinID: AAG59458
LinkDB
Position
complement(5369237..5369680)
AA seq 147 aa
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP
AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYE
DSLKQLARERYKAYRVAGFNLNTATWK
NT seq 444 nt   +upstreamnt  +downstreamnt
atgaaaaacgcgacgttctaccttctggacaatgacaccaccgtcgatggcttaagcgcc
gttgagcaactggtgtgtgaaattgccgcagaacgttggcgcagcggtaagcgcgtgctc
atcgcctgtgaagatgaaaagcaggcttaccggctggatgaagccctgtgggcgcgtccg
gcagaaagctttgttccgcataatttagcgggagaaggaccgcgcggcggtgcgccggtg
gagatcgcctggccgcaaaaacgcagcagcagcccgcgcgatatattgattagtctgcga
acaagctttgcagattttgccaccgctttcacagaagtggtagacttcgttccttatgaa
gattctctgaaacaactggcgcgcgaacgctataaagcctaccgcgtggctggtttcaac
ctgaatacggcaacctggaaataa

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