Escherichia coli O157 H7 EDL933 (EHEC): Z5915
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Entry
Z5915 CDS
T00044
Symbol
fimD
Name
(GenBank) outer membrane protein; export and assembly of type 1 fimbriae, interrupted
KO
K07347
outer membrane usher protein
Organism
ece
Escherichia coli O157:H7 EDL933 (EHEC)
Pathway
ece02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ece00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Z5915 (fimD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ece02000
]
Z5915 (fimD)
02044 Secretion system [BR:
ece02044
]
Z5915 (fimD)
02035 Bacterial motility proteins [BR:
ece02035
]
Z5915 (fimD)
Transporters [BR:
ece02000
]
Other transporters
Pores ion channels [TC:
1
]
Z5915 (fimD)
Secretion system [BR:
ece02044
]
Chaperone-usher system
Type 1 pilus assembly protein
Z5915 (fimD)
Bacterial motility proteins [BR:
ece02035
]
Pilus system
Fimbrial proteins
Z5915 (fimD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
AAG59499
UniProt:
Q8XC59
LinkDB
All DBs
Position
5429990..5432626
Genome browser
AA seq
878 aa
AA seq
DB search
MSYLNLRLYQRNTQCLHIRKHRLAGFFVRLFVACAFAVQAPLSSAELYFNPRFLADDPQA
VADLSRFENGQELPPGTYRVDIYLNNGYMATRDVTFNTGDSEQGIVPCLTRAQLASMGLN
TASVAGMNLLADDACVPLTTMVQDATAHLDVGQQRLNLTIPQAFMSNRARGYIPPELWDP
GINAGLLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSSDRSSGSK
NKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASDDNMLPDSQRGFAPV
IHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTV
PYSSVPLLQREGHTRYSITAGEYRSGNAQQEKPRFFQSTLLHGLPAGWTIYGGTQLADRY
RAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSLNESGTNIQLVGYR
YSTSGYFNFADTTYSRMNGYNIETQDGVIQVKPKFTDYYNLAYNKRGKLQLTVTQQLGRS
STLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLARNVNI
PFSHWLRSDSKSQWRHASASYSMSHDLNGRMTNLAGVYGTLLEDNNXSYSVQTGYAGGGD
GNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGVLAHANGVTLGQPLNDTVVL
VKAPGAKDAKVENQTGVRTDWRGYAVLPYATEYRENRVALDTNTLADNVDLDNAVANVVP
TRGAIVRAEFKARVGIKLLMTLTHNNKPLPFGAMVTSESSQSSGIVADNGQVYLSGMPLA
GKVQVKWGEEENAHCVANYQLPPESQQQLLTQLSAECR
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatctgaatttaagactttaccagcgaaacacacaatgcttgcatattcgtaag
catcgtttggctggtttttttgtccggctctttgtcgcctgtgcttttgccgtacaggca
cctttgtcatctgccgaactctattttaatccgcgctttttagcggatgatccccaggct
gtggccgatttatcgcgttttgaaaatgggcaagaattaccgccagggacgtatcgcgtc
gatatctatttgaataatggttatatggcaacgcgtgatgtcacatttaatacgggcgac
agtgaacaagggattgttccctgcctgacacgcgcgcaactcgccagtatggggctgaat
acggcttctgtcgccggtatgaatctgctggcggatgatgcctgtgtgccattaaccaca
atggtccaggacgctactgcgcatttagatgttggtcagcagcgactgaacctgacgatc
cctcaggcatttatgagtaatcgcgcgcgtggttatattcctcctgagttatgggatccc
ggtattaatgccggattgctcaattataatttcagcggaaatagtgtacagaatcggatt
gggggtaacagccattatgcatatttaaacctacagagtgggttaaatattggtgcgtgg
cgtttacgcgacaataccacctggagttataacagtagcgacagatcatcaggtagcaaa
aataaatggcagcatatcaatacctggcttgagcgagacataataccgttacgttcccgg
ctgacgctgggtgatggttatactcagggtgatattttcgatggtattaactttcgcggc
gcacaattggcctcagatgacaatatgttacccgatagccaaagaggatttgccccggtg
atccacggtattgctcgtggtactgcacaggtcactattaaacaaaatgggtatgacatt
tataatagtacggtgccgccggggccttttaccatcaacgatatctatgccgcaggtaat
agtggtgacttgcaggtaacgattaaagaggctgacggcagcacgcagatttttaccgta
ccctattcgtcagtcccgcttttgcaacgtgaagggcatactcgttattccattacggca
ggagaataccgtagtggaaatgcgcaacaggaaaaaccccgctttttccaaagtacatta
ctccacggccttccagctggctggacaatatatggtggaacgcaactggcagatcgttat
cgtgcttttaattttggtatcgggaaaaatatgggggcactgggcgctctgtctgtggat
atgactcaggctaattccacacttcccgatgacagtcagcatgacggacaatcggtgcgt
tttctctataacaaatcgctcaatgagtcaggcacgaatattcagttagtgggttaccgt
tattcgaccagcggatattttaatttcgctgatacaacatacagtcgaatgaatggctac
aacatcgaaacacaggacggagttattcaggttaagccgaaattcaccgactattacaac
ctcgcttataacaaacgcgggaaattacaactcaccgttactcagcaactcgggcgctca
tcaacactgtatttgagtggtagccatcaaacttattggggaacgagtaatgtcgatgag
caattccaggctggattaaatactgcgttcgaagatatcaactggacgctcagctatagc
ctgacgaaaaacgcctggcaaaaaggacgtgatcagatgttagcgcgtaacgtcaatatt
cctttcagccactggctgcgttctgacagtaaatctcagtggcgacatgccagtgccagc
tacagcatgtcacacgatctcaacggtcggatgaccaatctggctggtgtatacggtacg
ttgctggaagacaacaacytcagctatagcgtgcaaaccggctatgccgggggaggcgat
ggtaatagcggaagcacaggctacgccacgctgaattatcgcggtggttacggcaatgcc
aatatcggttacagccatagcgatgatattaagcagctctattacggagtcagcggtggg
gtactggctcatgccaatggcgtaacgctggggcagccgttaaacgatacggtggtgctt
gttaaagcgcctggcgcaaaagatgcaaaagtcgaaaaccagacgggggtgcgtaccgac
tggcgcggttatgccgtgctgccttatgccactgaatatcgggaaaatagagtggcgctg
gataccaataccctggctgataacgtcgatttagataacgcggtcgctaacgttgttccc
actcgtggggcgatcgtgcgagcagagtttaaagcgcgcgttgggataaaactgctcatg
acgctaacccacaataataagccgctgccgtttggggcgatggtgacatcagagagtagc
cagagtagcggcattgttgcggataatggtcaggtttacctcagcggaatgcctctagcg
ggaaaagttcaggtgaaatggggagaagaggaaaatgctcattgtgtcgccaattatcaa
ctgccaccagagagtcagcagcagttattaacccagctatcagctgaatgtcgttaa
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