Escherichia coli O157 H7 EC4115 (EHEC): ECH74115_1086
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Entry
ECH74115_1086 CDS
T00778
Name
(GenBank) putative peptidoglycan binding domain protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ecf
Escherichia coli O157:H7 EC4115 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecf01002
]
ECH74115_1086
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecf01011
]
ECH74115_1086
Peptidases and inhibitors [BR:
ecf01002
]
Cysteine peptidases
Family C82
ECH74115_1086
Peptidoglycan biosynthesis and degradation proteins [BR:
ecf01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ECH74115_1086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
HTH_upst_double_PIN
Motif
Other DBs
NCBI-ProteinID:
ACI38799
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Position
1114057..1115892
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AA seq
611 aa
AA seq
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MMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAVSEQGEALPQAQATAIMAGIL
PLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQLAEVA
IAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGYLHFIANIPVKGTRWLYSSKPYALA
TPPLSVINQWQQALDKGQLPTFVAGLAPQHPQYAVMHESLLALLSDTKPWPQLTGKATLR
PGQWSNDVPALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTT
SRSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQ
RLRLLPTELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPP
WNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQ
QAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQD
AGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPARSSS
QIVSKAEQLIR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtggtcgtcggctgtcggcaatcagtttgtgcctggccgtaacattcgctcca
ctgttcaatgcgcaggccgatgagcctgaagtaatccctggcgacagcccggtggctgtc
agtgaacagggcgaggcactgccgcaggcgcaagccacggcaataatggcggggatcctg
ccattgcctgaaggtgcggcagaaaaagcccgcacgcaaatcgaatctcaattacccgca
ggttacaagccggtttatcttaaccagcttcaactgttgtatgccgcacgcgatatgcaa
cccatgtgggaaaaccgtgatgctgttaaagccttccagcaacagctggcagaggtggcg
attgccggtttccagccgcagtttaataaatgggtagagttactgaccgatcctggtgtt
aacgggatggcacgcgacgtggtgctctctgatgcgatgatgggctatctccatttcatt
gcaaatattccggtcaaaggcactcgctggctatatagcagtaaaccttatgcgcttgca
acgccgccgctttcggtgattaaccaatggcagcaggcgctggataaaggtcaattgcct
acgtttgttgcaggactggcaccgcagcatccgcaatatgcggtgatgcatgaatcgtta
ctggccttactcagtgacaccaaaccgtggccccaactgaccggcaaagcaacgttgcgc
ccagggcagtggagtaacgacgtaccggcgttgcgtgaaatattgcaacgcacaggcatg
ttggacggggggccgaaaattactctacctggcgatgacacgccaactgacgcggtagtc
agcccatccgctgttactgttgaaacagcagaaactaagccgatggataagcaaacgacg
tctcgtagtaaacctgcgcctgccgttcgcgccgcctacgataatgaactggtggaagcc
gttaaacgttttcaggcatggcaaggattgggggcagatggtgctattggcccggcaacg
cgtgactggttaaacgtaacgcccgcccagcgtgctggcgtgttggctctcaacatccag
cgattgcgcttgctgccaacagagctttctaccgggatcatggttaacattccggcctat
tcgctggtctactatcagaacggcaatcaggtgctggattcgcgagtcattgtcggtcgc
cccgatcgcaaaacgccgatgatgagcagtgcccttaacaatgtagtggtaaacccgccg
tggaacgtacctccaactctggcacgcaaagatattctgccgaaagtgcgcaacgatccg
ggatatctcgaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgatt
gacccatggcaggttgactggtctacaatcacggcctcgaatttaccgtttcgcttccaa
caggctccaggcccacggaactcgctggggcgctataaattcaatatgccgagttcagag
gccatttatttgcatgacacgccgaaccacaatctgttcaagcgtgatacacgcgcattg
agctcaggctgtgtacgagtgaataaagcttccgatctggcgaatatgctgttgcaggat
gcaggctggaatgacaaacgtatttctgatgcgctgaagcagggtgatacacgttacgtc
aatattcggcagtcgattccggtgaatctctactacctgacggcctttgttggtgcagat
ggtcgtacccagtatcgtacagatatttacaattatgatctgcctgcgcgatccagctcg
caaatcgtatcgaaagcggaacaattaatcaggtaa
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