KEGG   Escherichia coli O157 H7 EC4115 (EHEC): ECH74115_2365
Entry
ECH74115_2365     CDS       T00778                                 
Symbol
lhr
Name
(GenBank) DEAD/DEAH box helicase family protein Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ecf  Escherichia coli O157:H7 EC4115 (EHEC)
Brite
KEGG Orthology (KO) [BR:ecf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecf03400]
    ECH74115_2365 (lhr)
Enzymes [BR:ecf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ECH74115_2365 (lhr)
    5.6.2.6  RNA 3'-5' helicase
     ECH74115_2365 (lhr)
DNA repair and recombination proteins [BR:ecf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ECH74115_2365 (lhr)
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD WHD_2nd_Lhr WHD_3rd_Lhr WHD_4th_Lhr Helicase_C ResIII WHD_MCM4 Replic_Relax Cas3-like_C_2 DDRGK
Other DBs
NCBI-ProteinID: ACI37653
LinkDB
Position
2235108..2239724
AA seq 1538 aa
MADNPNPSSPLPDVFSPATRDWFLRAFKQPTAVQSQTWHVAARGEHALVIAPTGSGKTLA
AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG
ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE
VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA
MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN
SRGLAEKLTARLNELYAARLQRSPSIAADAAHFESTSGATSNRVQSSDVFIARSHHGSVS
KEQRAITEQALKSGELRCVVATSSLELGIDMGAVELVIQVATPLSVASGLQRIGRAGHQI
GGISKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQHTVAAAAMDALQVD
EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL
LAVTSGGTIPDRGMYSVLLPEGEEQAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI
TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN
TIANIQGLIDEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWALAIAGR
IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF
RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPAILETLRECLQDVYDLPA
LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL
LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH
TGSSEEIASYLENLLTVKRIFPTMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV
SYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV
FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM
RVIEQLAGVGLPASLWESQILPARVHDYSPEVLDELLATGAVIWSGQKKLGEDDGLVALH
LQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDPSALQE
ALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN
LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS
GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQAAQTRHYTPVALSANDPANVWGNLLPWP
AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP
RLRFTLTEVNDLPVWQTPMFTLLREAGFSSSPQGLDWG
NT seq 4617 nt   +upstreamnt  +downstreamnt
atggcagataatccaaacccttcatcgcccctgccggacgtgttttcaccggcgacccgc
gactggtttcttcgcgcctttaaacagccgaccgctgtccagtcgcaaacctggcatgtg
gcggcgcgaggcgaacatgcgctggtgattgcaccgactggctccgggaaaacgctggca
gcatttctctacgccctcgatcgactcttccgcgaaggcggcgaagatacccgcgaggcg
cataaacgtaaaacctcacgcatcctctatatttcaccgataaaagccctgggcaccgac
gttcagcgcaacttgcagatcccgttgaagggtattgccgatgaacggcggcggcgcggc
gaaacggaagtcaatcttcgcgtggggatccgtactggcgatacgcctgcacaggaacgc
agcaaactcacccgtaatccgccggatattctgatcaccacacccgaatcactctatctg
atgctgacctcccgcgcgcgcgaaacgctacgcggcgtcgaaacggtaattattgatgaa
gtccacgcggtagcgggaagtaaacgtggtgcgcatctggcgttaagtctggagcggctc
gatgcgctgctccacacctcagcacagcgaattggcctttctgccactgtgcgctcagcc
agcgatgtggcagcatttcttggtggcgatcgcccggttacggtagtcaacccgcccgca
atgcgtcatccgcagatacggattgtcgtaccagtcgccaatatggatgatgtctcatcg
gtcgccagcggcactggcgaagacagccatgccggccgggaaggctccatctggccatat
attgaaacgggtatccttgatgaagtgttgcgccatcgctcgaccattgtctttactaat
tcgcgggggctggcggaaaaactgacggcacgattaaatgagctttacgccgcacgctta
cagcgttccccgtctatcgccgctgatgcggcccatttcgagtcgacctctggcgcaacc
tctaaccgtgtacaaagtagcgacgtttttattgcccgctcacaccacggctccgtctct
aaagaacaacgagcaatcaccgagcaggcgctgaaatcgggtgagttacgctgcgtggtc
gcaacttccagtctcgaactggggattgatatgggcgctgtggagctggtgattcaggtg
gcaacgccgctttctgttgccagtgggttacaacgcattggacgtgccggacaccagata
ggaggtatctccaaagggctttttttcccccgaaccaggcgtgacttagtcgattccgca
gtcattgtagagtgtatgttcgcaggcaggctggaaaacctgacacctccgcataatcca
ctcgacgtccttgcgcagcacaccgttgccgccgcggcgatggatgcattacaggtagac
gaatggtactcccgcgtacgccgtgccgcaccgtggaaagatctgccaagacgtgttttt
gacgccacgctggatatgctttccggacgctatccctctggcgatttttctgcttttcgc
cccaaactggtctggaacagggagaccgggatattgaccgcccgacctggcgctcagctg
ttggcggttaccagcggcggcaccattccggatcgtggcatgtatagcgtgttattaccc
gaaggggaagaacaggccggttcgcgacgggtgggtgaactggatgaggagatggtatat
gagtcgcgggtgaacgatattatcactctcggcgcaacctcatggcggatccagcaaatc
acccgcgatcaggtgattgtgactcctgctccgggtcgttctgcccggctccccttctgg
cgtggtgaaggtaacggacgtccggctgaattaggcgagatgatcggcgattttcttcat
ttgctggcggatggagcgttcttttccgggactattcccccgtggctggctgaagaaaat
acgatcgccaatattcaggggttgattgacgagcagcgcaacgcgacgggtattgttccg
gggagtcgtcatctggtcctcgaacggtgccgtgatgaaattggcgattggcgtattatt
ttgcactctccctatggaagacgggtgcatgaaccctgggcgctggcgattgccgggcga
atacatgcgctttggggcgctgacgcgtctgtggtcgccagtgatgacggcattgttgcg
cgcattcctgacactgatggtaaattgcccgacgccgcgatttttttgtttgaaccagaa
aagttgctgcaaattgtccgcgaggcggtaggcagttcggcacttttcgccgcccgtttt
cgcgaatgcgccgcgcgggcattattaatgccgggccgcacgccgggccatcgcaccccg
ctttggcaacaacggctgcgcgccagtcagttgctggaaatcgctcagggatatccggat
tttccggccattctcgaaaccctacgcgaatgtctgcaagatgtttatgatcttcccgca
ctggaacgtttgatgcgtcgcctgaacggaggcgaaattcaaatatccgatgtaacgact
actacgccctcgcctttcgccacaagtttattgttcggctatgtcgcggaatttatgtac
cagagcgacgccccgctggcagaacgccgggcatccgtactgtcgctggacagcgagtta
ctgcgcaatctactcggacaggtcgatccgggggaattactcgacccgcaggtcattcgc
caggtggaagaagagttgcaacgactggctcctggcagaagagcgaaaggtgaagaagga
ttgttcgacctgctgcgcgaactggggccaatgaccgttgaagacctggcgcaacggcat
acaggcagcagtgaagagattgcctcgtatctggaaaatcttcttacagtaaaacgcatc
ttcccgacgatgattagtggacaggagcgtcttgcctgtatggatgatgccgccaggctg
cgcgatgccctcggcgtacgattaccagagtcactgccagagatttatttgcatagagtc
agttacccgcttcgcgacctctttctacgctatctccgggctcatgctctggtcacggct
gaacaactggctcatgagtttagtctcggtattgccattgtcgaagagcagcttcagcaa
ctgcgcgaacagggtctggtgatgaatctgcaacaagacatctgggtgagcgatgaagta
tttcgtcgtctgcgtttgcgctcgctgcaagccgccagagaagcgacgcgtcccgttgca
gccacgacctatgcgcgattgctgctggaacgtcagggcgtattacccgccaccgatggt
agcccggcgctctttgcctcaacatcgccaggcgtttatgagggggtggatggcgtgatg
cgggtgatcgaacagcttgccggagtcggcttacccgcctcactctgggaaagccagatc
ttgcctgcccgcgtacacgactattcgccagaagtgctcgatgaattactggcaaccggt
gcggttatctggtcggggcaaaaaaaactgggtgaagatgacggcctggtggcactgcat
ctacaggaatatgctgcagaatcgttcactcccgccgaagcggatcaggcgaatcgttcg
gcgctgcaacaagcgatagtcgctgttctggctgacggaggagcctggtttgcacaacaa
atcagccaacggatacgcgacaaaatcggcgaatcggttgatccctcggcactgcaagag
gcgttatgggcgctggtctggcaaggcgtcatcaccagcgatatttgggcaccgttacgc
gccctcacccgcagcagttccaacgcacgcacctcaactcgccgcagtcaccgggctcgt
cgtgggcgtcctgtctatgcacaacccgtctcgccgcgggtatcttacaacacaccaaat
ctggctggacgctggtcgttattgcaggtggagccactaaacgataccgaaaggatgctg
gcgctggcggaaaatatgctcgaccgctacggcatcatcagtcgtcaggcggtgatagcc
gaaaatatccctggcgggtttccatcgatgcaaacgctttgtcgaagtatggaagattcc
gggcgaattatgcgaggtcgttttgtagaaggtctgggtggcgcgcaattcgctgaacgt
ctgactattgaccgcttgcgcgacctggcgacacaagccgcgcaaacgcgccactataca
ccagtggcgctctccgccaacgatccggctaatgtgtggggaaatcttctgccctggcct
gcacatccggcaacgctggtaccaacgcgtcgggcgggtgcgctggtggtcgtttctggc
ggcaaattgttactctatctggcgcaaggtggcaaaaaaatgctggtctggcaggaaaaa
gaggaattactcgccccagaggttttccacgcgctgactaccgcactgcgtcgcgaacca
cggctgcgctttacgctaacagaagtgaatgatctaccggtctggcaaacgccgatgttt
acgctgctgcgtgaagcgggattttcaagttcgccacaagggctggattggggatag

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