Escherichia coli O157 H7 EC4115 (EHEC): ECH74115_4524
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Entry
ECH74115_4524 CDS
T00778
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ecf
Escherichia coli O157:H7 EC4115 (EHEC)
Pathway
ecf02020
Two-component system
ecf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ecf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECH74115_4524 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ECH74115_4524 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecf03021
]
ECH74115_4524 (rpoN)
Transcription machinery [BR:
ecf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ECH74115_4524 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
ACI36079
LinkDB
All DBs
Position
4188837..4190270
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQIDTHEEIDTRE
TQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSGDYIDDELPVYQGETTQTL
QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLEDILESMGDEEIDIDEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARLIISDHLDLLANHDFRTLMRVTR
LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGHWTVELNSDSIPRLQIN
QHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggcttagccaacaactggcgatgacgccacagctccaa
caggcaattcgtctgttgcagttgtcgacgctggaacttcagcaggagctacagcaggcg
ctggagagtaatccgctgcttgagcaaatcgacactcatgaagaaatcgacacccgcgaa
acgcaagacagtgaaacgctggacaccgccgacgcgctcgaacaaaaagagatgccggaa
gagctgccgctcgatgccagttgggacaccatttacaccgctggtacaccatccggcacc
agcggtgactacattgacgacgagctgccggtctatcagggcgaaacgacgcagaccttg
caggattacctgatgtggcaggtcgagctgacaccgttttccgacactgaccgcgctatt
gctacctctatcgtcgatgccgttgatgacaccggttatctgactgtcccgctggaagat
attctcgaaagtatgggcgatgaagagatcgacatcgacgaagttgaagccgtccttaag
cggatccaacggtttgatccggtcggtgtggcggcaaaagatctgcgtgactgcctgctg
atccaactctcccaattcgataaaaccacgccgtggctggaagaggccagactgatcatt
agcgatcatctcgatctgttagccaatcacgacttccgcactttaatgcgcgtcacgcgt
ctgaaagaagatgtgctgaaagaagccgtcaatctgatccagtcgctcgatccgcgcccc
gggcaatcgatccagactggcgaacctgagtatgtcattccagatgtgctggtgcgtaag
cataacggtcactggacggtagaactcaacagtgacagcattcctcgtctgcaaatcaac
cagcactacgcctcgatgtgcaataacgcgcgcaatgatggtgacagccagtttatccgc
agcaatctgcaagatgccaaatggttgatcaagagtctggaaagccgtaacgatacgcta
ctgcgcgtgagtcgctgtatcgttgaacagcagcaagccttctttgagcaaggcgaagaa
tatatgaaaccgatggtactggccgatatcgcccaggctgtcgaaatgcatgaatcgacg
atatctcgcgtgaccacgcaaaaatacctgcatagtccacgaggcatttttgaactgaag
tatttcttttccagtcacgtcaataccgagggcggcggcgaagcttcctccacggcgatt
cgtgcgctggtgaagaaattaatcgcggcggaaaacccagcgaaaccgttgagcgacagc
aagttaacctctttgctgtcggaacaaggtatcatggtggcacgccgcactgttgcgaag
taccgagagtctttatccattccgccgtcaaaccagcgtaaacagctcgtttga
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