KEGG   Escherichia coli O157 H7 EC4115 (EHEC): ECH74115_5053
Entry
ECH74115_5053     CDS       T00778                                 
Name
(GenBank) type III secretion apparatus protein, YscD/HrpQ family
  KO
K03220  type III secretion protein D
Organism
ecf  Escherichia coli O157:H7 EC4115 (EHEC)
Brite
KEGG Orthology (KO) [BR:ecf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecf02044]
    ECH74115_5053
Secretion system [BR:ecf02044]
 Type III secretion system
  Type III secretion core apparatus
   ECH74115_5053
SSDB
Motif
Pfam: Yop-YscD_ppl_2nd Y4YQ_C Yop-YscD_ppl_1st
Other DBs
NCBI-ProteinID: ACI38019
LinkDB
Position
4698078..4699298
AA seq 406 aa
MLSSYKIKLLNGAMRNRELQLPMGNLTLGTEDNDIVYFPLEQGLNQFLLDIREEGVFLLS
PVEFWIDGQPTPYEADKPLPVGKVIDIAGCCFIIGDIDHSLPLSDVPERFSAKSRRKKRL
ILASVIGATFALSGAIGSYVLLSPKAEPPTFTRADVYQQLKENKLHAITLVWHGKNIALY
GRCESTTDLTPFFNYLKEKNIFYYNNIICNNQIISAINDVLTEYGYKDIIITKGNKPGFF
LLSGYIPPSPKWSEVENLLLNTPGVAGWEIHNNSNNKINELASEFKKNKLINYVNIFKKN
DVIIVAGEVSQQNESKILAIINAMNKNSNAKILFQNIQPYISADIFPGKILRISGTMKNP
TIALDNGTSLGIGSILKGGYVIDAIDPKDGINISRPDEYIHIPLSY
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgttatcctcatataaaataaaacttctcaatggtgcgatgcgtaatcgggaattacaa
cttccgatgggaaacctaacgctaggtacggaagataacgatattgtttactttcccctt
gaacaaggcctcaatcagtttttacttgatatacgtgaggaaggtgttttccttttatct
ccggttgaattttggattgatgggcaacccacgccctatgaagcagataaaccattacct
gtcggaaaggttattgatatagcgggatgttgcttcatcattggtgatattgaccattcc
ttgccattgtctgatgtgccagaaaggttctctgccaaaagtcgacgcaaaaaacgcctt
atcctggcgagcgtgattggtgctacttttgcgttgtctggtgccatcggcagttacgtt
ttgctttccccaaaagctgaacccccaacgtttaccagagctgatgtatatcagcagcta
aaagaaaacaaacttcatgcaatcactctggtatggcatgggaaaaatatcgcgctttat
gggcgttgcgaatcaaccacggatttaactccattttttaattacctaaaagaaaaaaat
attttttattacaataatatcatttgcaataaccaaatcatatccgcaattaatgatgtc
ttaacggaatacggttacaaagatatcattattacaaaaggtaataagcctggattcttt
ctgttatcgggatacattcccccttcacccaaatggagcgaggttgaaaatctgttactg
aatacgccaggagttgcaggatgggaaatacacaacaacagtaacaataaaatcaatgaa
ctggcatcagagtttaaaaagaataaactaataaactatgtcaatattttcaaaaagaat
gatgtcatcattgttgcgggggaagtttctcaacagaatgagagtaagatccttgccatt
ataaatgcaatgaacaaaaatagtaacgccaagatactctttcagaacattcagccgtac
atttcagcagatattttccccggaaaaatactcagaatcagcggtacgatgaagaatcca
acaattgctcttgataatggcaccagcctggggattggtagcattctgaaaggaggctat
gtcatagacgcgattgatcctaaagatggtatcaacatctcccgcccagacgaatatata
catattccactgtcgtattaa

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