Escherichia coli O157 H7 EC4115 (EHEC): ECH74115_B0046
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Entry
ECH74115_B0046 CDS
T00778
Symbol
sopB
Name
(GenBank) plasmid partition protein B
KO
K03497
ParB family transcriptional regulator, chromosome partitioning protein
Organism
ecf
Escherichia coli O157:H7 EC4115 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecf03000
]
ECH74115_B0046 (sopB)
03036 Chromosome and associated proteins [BR:
ecf03036
]
ECH74115_B0046 (sopB)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecf04812
]
ECH74115_B0046 (sopB)
Transcription factors [BR:
ecf03000
]
Prokaryotic type
Other transcription factors
Others
ECH74115_B0046 (sopB)
Chromosome and associated proteins [BR:
ecf03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
ECH74115_B0046 (sopB)
Cytoskeleton proteins [BR:
ecf04812
]
Prokaryotic cytoskeleton proteins
MinD / ParA class of bacterial cytoskeletal proteins
ECH74115_B0046 (sopB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SoPB_HTH
ParBc
Caudo_TAP
Motif
Other DBs
NCBI-ProteinID:
ACI34524
LinkDB
All DBs
Position
pO157:19949..20920
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AA seq
323 aa
AA seq
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MKRAPVIPKHTLNTQPVEDTSLSTPAAPMVDSLIARVGVMARGNAITLPVCGRDVKFTLE
VLRGDSVEKTSRVWSGNERDQELLTEDALDDLIPSFLLTGQQTPAFGRRVSGVIEIADGS
RRRKAAALTESDYRVLVGELDDEQMAALSRLGNDYRPTSAYERGQRYASRLQNEFAGNIS
ALADAENISRKIITRCINTAKLPKSVVALFSHPGELSARSGDALQKAFTDKEELLKQQAS
NLHEQKKAGVIFEAEEVITLLTSVLKTSSASRTSLSSRHQFAPGATVLYKGDKMVLNLDR
SRVPTECIEKIEAILKELEKPAP
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgcgcctgttattccaaaacatacgctcaatactcaaccggttgaagatact
tcgttatcgacaccagctgccccgatggtggattcgttaattgcgcgcgtaggagtaatg
gctcgcggtaatgccattactttgcctgtatgtggtcgggatgtgaagtttactcttgaa
gtgctccggggtgatagtgttgagaagacctctcgggtatggtcaggtaatgaacgtgac
caggagctgcttactgaggacgcactggatgatctcatcccttcttttctactgactggt
caacagacaccggcgttcggtcgaagagtatctggtgtcatagaaattgccgatgggagt
cgccgtcgtaaagctgctgcacttaccgaaagtgattatcgtgttctggttggcgagctg
gatgatgagcagatggctgcattatccagattgggtaacgattatcgcccaacaagtgct
tatgaacgtggtcagcgttatgcaagccgattgcagaatgaatttgctggaaatatttct
gcgctggctgatgcggaaaatatttcacgtaagattattacccgctgtatcaacacagcc
aaattgcctaaatcagttgttgctcttttttctcaccccggtgaactatctgcccggtca
ggtgatgcacttcaaaaagcctttacagataaagaggaattacttaagcagcaggcatct
aaccttcatgagcagaaaaaagctggggtgatatttgaagctgaagaagttatcactctt
ttaacttctgtgcttaaaacgtcatctgcatcaagaactagtttaagctcacgacatcag
tttgctcctggagcgacagtattgtataagggcgataaaatggtgcttaacctggacagg
tctcgtgttccaactgagtgtatagagaaaattgaggccattcttaaggaacttgaaaag
ccagcaccctga
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