Escherichia coli O127 H6 E2348/69 (EPEC): E2348C_0189
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Entry
E2348C_0189 CDS
T00796
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ecg
Escherichia coli O127:H6 E2348/69 (EPEC)
Pathway
ecg03030
DNA replication
ecg03430
Mismatch repair
ecg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2348C_0189 (dnaE)
03430 Mismatch repair
E2348C_0189 (dnaE)
03440 Homologous recombination
E2348C_0189 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecg03032
]
E2348C_0189 (dnaE)
03400 DNA repair and recombination proteins [BR:
ecg03400
]
E2348C_0189 (dnaE)
Enzymes [BR:
ecg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2348C_0189 (dnaE)
DNA replication proteins [BR:
ecg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E2348C_0189 (dnaE)
DNA repair and recombination proteins [BR:
ecg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E2348C_0189 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAS07737
UniProt:
B7UJ85
LinkDB
All DBs
Position
215127..218609
Genome browser
AA seq
1160 aa
AA seq
DB search
MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIDRDW
LIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEEHFPDRYFLELIRTGRPDEES
YLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDYLVKRAKEGL
EERLVFLFPDEEERLKRRPEYDERLDTELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFAEGAEKNGINAELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNKGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTERGKVTTAAGLVVAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccacgtttcgtacacctgcgggtgcacagcgactactcgatgatcgatggc
ctggccaaaaccgcaccgctggtaaaaaaggcggcggcgttgggtatgccagcactggcg
atcaccgatttcaccaacctttgcggtctggtgaagttctacggagcgggacatggcgca
gggattaagcccatcgtcggggcggattttaacgtccagtgcgacctgctgggtgatgag
ttaacccacctgacggtgctggcggcgaacaataccggctatcagaatctgacgttgctg
atctcaaaagcgtatcagcgcgggtacggtgccgccgggccgatcatcgatcgcgactgg
cttatcgaattaaacgaagggttgatccttctttccggcgggcgcatgggcgacgtcgga
cgcagtcttttgcgtggtaatagcgcgctggtagatgagtgtgtcgcgttttatgaagaa
cacttcccggatcgctattttctcgagctgatccgcactggaaggccggacgaagaaagc
tatctgcacgcggcggtggaactggcggaagcgcgcggtttacccgtcgtggcgaccaac
gacgtgcgctttatcgacagcagcgactttgacgcacacgaaatccgcgtcgcgatccac
gacggctttaccctcgacgatcctaaacgcccgcgtaactattcgccgcagcaatatatg
cgtagcgaagaggagatgtgtgagctgtttgccgatatccccgaagcccttgccaacacc
gttgagatcgccaaacgttgtaacgtaactgtgcgtctgggtgaatacttcttgccgcaa
ttcccgaccggggacatgagtaccgaagattatctggtcaagcgtgcaaaagaaggcctg
gaagagcgtctggtatttttattccctgacgaggaagaacgtcttaagcgtcgtccggag
tatgacgaacgtctggatactgaacttcaggttatcaaccagatgggcttcccgggttac
ttcctcatcgttatggaatttatccagtggtcgaaagataacggtgtaccggtagggcca
ggccgtggttctggtgcagggtcactggtggcctacgcgttaaaaatcaccgatctcgat
ccgctggaatttgacctgctgttcgaacgtttccttaacccggagcgtgtctccatgcct
gacttcgacgttgacttctgtatggagaaacgcgaccaggttatcgagcacgtagcggac
atgtacggtcgtgatgcggtatcgcagattatcaccttcggtacgatggcggcgaaagcg
gtgatccgcgacgtaggccgcgtgctggggcatccgtacggctttgtcgaccgtatctcg
aaactgatcccgcccgatccgggtatgacgctggcgaaagcgtttgaagccgagccgcag
ctgccggaaatctacgaagcggatgaagaagttaaggcgctgatcgacatggcgcgcaaa
ctggaaggggtcacccgtaacgccggtaagcacgccggtggggtggttatcgcgccgacc
aaaattactgattttgcgccgctttattgcgatgaagagggcaaacatccggtcacccag
tttgataaaagcgacgttgaatacgccgggctggtgaagttcgacttcctcggtttgcgt
acgctcaccatcatcaactgggcgctggagatgatcaacaagcggcgggcgaagaatggc
gagccgccgctggatatcgccgcgatcccgctggatgacaagaaaagcttcgacatgctg
caacgctcggaaaccacggcggtattccagcttgaatcgcgcggcatgaaggacctgatc
aagcgtctgcaacctgactgcttcgaagatatgatcgcactggtggcactgttccgcccc
ggcccgttgcaatcagggatggtggataactttatcgaccgtaaacatggtcgcgaagag
atctcctatccggacgtgcagtggcagcatgaaagcctgaaaccggtactggagccaacc
tacggcatcatcctgtatcaggaacaggttatgcagattgcccaggtgctttctggttat
accctcggtggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccagaagagatg
gctaagcagcgttctgtatttgctgaaggtgcagaaaagaacggaatcaacgccgaactg
gcgatgaaaatcttcgacctggtggagaaattcgcgggttacggatttaacaaatcgcac
tctgcggcctatgctttggtgtcatatcaaacgttatggctgaaagcgcactatccggcg
gagtttatggcggcggtaatgaccgccgatatggacaacaccgagaaggtggtgggcctg
gtggatgagtgctggcggatggggctgaaaatcctaccgccggatataaactccggtctt
taccatttccacgtcaacgacgacggcgaaatcgtgtatggtattggcgcgatcaaaggg
gtaggtgaaggtccgattgaggccatcatcgaagcccgtaataaaggcggctacttccgc
gaactgtttgatctctgcgcccgtaccgacaccaaaaagttaaaccggcgggtgctggaa
aaactgatcatgtccggggcgtttgaccgtcttgggccacaccgcgcggcgctgatgaac
tcgctgggtgatgcgttaaaagcggcagatcaacacgcgaaagcggaagctatcggtcag
gccgatatgttcggcgtgctggccgaagagccggaacaaattgaacaatcctacgccagc
tgccaaccgtggccggagcaggtggtgttagatggggaacgtgaaacgttaggtctgtac
ctgacgggacaccctatcaaccagtatttaaaagagattgagcgttatgtcggaggcgta
aggctgaaagacatgcacccgacagaacgtggtaaagtcaccacggctgcggggctcgtt
gttgctgcgcgggttatggtcaccaagcgcggcaatcgtatcggtatctgcacgctggat
gaccgttccgggcggctggaagtgatgttgtttactgacgccctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggtgggcttaaaatgaccgctcgcgaagtgatggatattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctctgggacaattccagtacatctctactatcag
agggcggatgcacgcgcgcgattgcgttttggcgcgacgtggcgtgtctctccgagcgat
cgtttattaaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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