Escherichia coli O127 H6 E2348/69 (EPEC): E2348C_0437
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Entry
E2348C_0437 CDS
T00796
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase, selenophosphate-dependent
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
ecg
Escherichia coli O127:H6 E2348/69 (EPEC)
Brite
KEGG Orthology (KO) [BR:
ecg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecg03016
]
E2348C_0437 (ybbB)
Enzymes [BR:
ecg01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
E2348C_0437 (ybbB)
Transfer RNA biogenesis [BR:
ecg03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
E2348C_0437 (ybbB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhodanese
T2SSE
AAA_16
AAA_18
AAA_23
DUF3333
Motif
Other DBs
NCBI-ProteinID:
CAS07985
UniProt:
B7UKI1
LinkDB
All DBs
Position
complement(488095..489189)
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AA seq
364 aa
AA seq
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MQERHTEQDYRALLIADTPIIDVRAPIEFEQGAMPAAINLPLMNNDERAAVGICYKQQGS
DAALAQGHKLVAGEIRQQRMDAWRAACLQNPHGILCCARGGQRSHIVQRWLHDAGIDYPL
VEGGYKALRQTAIQATIELAQKPIVLIGGCTGSGKTLLVQQQPNGVDLEGLARHRGSAFG
RTLQPQLSQASFENLLAAEMLKTDAHQDLRLWVLEDESRMIGSNHLPECLRERMTQATIA
VVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQEYCEYLHHGLSAIKRRLGLQRYNE
LAARLDAALTTQLTTGSTDGHLAWLVPLLEEYYDPMYRYQLEKKAEKVVFHGEWAEVAEW
VKTQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagagacacacggaacaggactatcgtgccctgctgattgctgatacgcccatt
attgatgttcgcgcccccatcgagtttgagcaaggcgcaatgcccgccgctatcaacctg
ccgttaatgaataacgatgaacgcgccgccgttggcatctgctataaacagcaagggtca
gacgcggcgctggcacaggggcataaactggtggcgggtgaaattcgtcagcagcgcatg
gacgcctggcgggcagcgtgcctgcaaaatccgcacggtattctctgctgcgcccgtggc
ggtcagcgctcacatattgtgcaacgctggttgcatgacgcggggattgattatccgctg
gtggaaggcggttataaggcactgcgccagaccgcgattcaggcaaccattgaactggca
caaaaaccgatagtgctgattggcggttgtaccggcagcggtaagacgctgttagtacaa
caacagccgaacggtgttgatctggaagggctggcgcgccatcgcggttctgcttttggt
cgcacgttacaaccgcaacttagccaggcgagttttgaaaacctgctggctgccgaaatg
ctaaaaaccgacgcccatcaggatttgcgcctgtgggtgctggaagatgaaagccggatg
atcggttcgaatcacctgccggaatgtctgcgcgaacgaatgactcaggcgacgattgcg
gtggtagaagatccgtttgagatccgtcttgaacgcctgaacgaagaatatttcttgcgt
atgcatcatgattttacccacgcttatggcgacgaacagggctggcaggagtattgcgaa
tacctgcatcacgggctttcggcgattaaacgtcggctgggactacaacgctataacgaa
ctggctgcaaggctggatgcggcgctgacaacgcaactcaccaccggcagcaccgacggt
catctggcctggctggtgccgttacttgaagaatattacgacccgatgtatcgctatcag
cttgagaaaaaagcggaaaaagttgtctttcacggtgagtgggcggaagtggcggaatgg
gttaagacgcagtga
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