Escherichia coli O127 H6 E2348/69 (EPEC): E2348C_1535
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Entry
E2348C_1535 CDS
T00796
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase, specific for 23S rRNA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ecg
Escherichia coli O127:H6 E2348/69 (EPEC)
Brite
KEGG Orthology (KO) [BR:
ecg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecg03009
]
E2348C_1535 (dbpA)
Enzymes [BR:
ecg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
E2348C_1535 (dbpA)
Ribosome biogenesis [BR:
ecg03009
]
Prokaryotic type
rRNA helicases
E2348C_1535 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAS09083
UniProt:
B7URE8
LinkDB
All DBs
Position
1576057..1577430
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AA seq
457 aa
AA seq
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MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG
LLQQIDVSLFQTQGLVLCPTRELADQVAGELRRLARFLLNTKILTLCGGQPFGMQRDSLQ
HAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT
LLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
PSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV
AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDML
QIKLNWQTPPANSSIVPLKAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAV
HPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctttttctaccctgaatgttttgcctcccgcccaactcacaaaccttaatgag
ttgggttatttaaccatgacgccggtgcaggccgccgcgcttccggcgatccttgccgga
aaagatgttcgcgtgcaggcgaaaaccggcagcggcaaaacggcggcttttggcctcggc
ttgttacagcaaattgatgtgtcgctatttcaaacccagggtttagtgctgtgtcctacg
cgtgaactggcggatcaggtggcaggtgaattgcgtcggctggcgcgttttctgctaaat
accaaaattttgacgttgtgcggtggtcaaccgttcggtatgcagcgtgattcgttgcaa
catgcgccgcatattatcgtggcaacgccgggccgtttgctggatcacctgcaaaaaggc
actgtatcactggatgcgttgaatacgctggtgatggatgaggccgaccgcatgctggat
atgggatttagtgacgccattgatgatgtcatccgttttgcgccagcatctcggcagaca
cttctgttttcggcaacctggccggaagccattgccgcaatcagcggaagagtgcaacgc
gatcctttagcgattgaaattgactcaacagatgctctgccacctattgaacaacaattt
tatgagacatccagcaaaggcaaaattcctctgttgcaacggttattaagcttgcatcag
ccatcctcttgcgtggtgttttgcaataccaaaaaagattgccaggctgtctgtgacgcg
ctgaatgaagtagggcaaagtgcattgtcgttacacggcgatctggagcaacgcgatcgc
gatcagaccctggtacgttttgctaacggtagcgcccgtgtactggtcgcgactgatgtt
gctgcgcgtggtctggatataaaatcgcttgagctggtggtgaactttgagctggcgtgg
gaccctgaagttcatgtacatcgcatcggtcgtacagctcgtgcaggaaatagcggtctg
gcgatcagtttctgtgccccggaagaagcacagcgggccaatatcatttctgacatgttg
cagataaaacttaactggcaaacgccgccagcaaatagttccattgtgccgctgaaagca
gaaatggcaacgttgtgtatcgatggcgggaaaaaagccaaaatgcgcccgggtgatgta
ttaggtgcgctgacaggagacatcgggcttgatggcgcagatattggcaaaattgccgtg
catccggcgcatgtctatgtcgcggtgcgtcaggctgttgctcataaagcatggaaacag
ctacagggtgggaagattaaaggaaaaacgtgccgggtgcggttattaaaataa
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