Escherichia coli O127 H6 E2348/69 (EPEC): E2348C_2235
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Entry
E2348C_2235 CDS
T00796
Symbol
gatR
Name
(GenBank) DNA-binding transcriptional repressor GatR of galactitol utilization
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
ecg
Escherichia coli O127:H6 E2348/69 (EPEC)
Brite
KEGG Orthology (KO) [BR:
ecg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecg03000
]
E2348C_2235 (gatR)
Transcription factors [BR:
ecg03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
E2348C_2235 (gatR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
GntR
HTH_11
CoA_trans
HTH_PafC
CggR_N
HTH_5
FeoC
DUF977
SelB_WH_2nd_bact
MarR
DsrD
Motif
Other DBs
NCBI-ProteinID:
CAS09783
UniProt:
B7UTC8
LinkDB
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Position
complement(2299901..2300680)
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AA seq
259 aa
AA seq
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MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK
IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMT
AKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGA
DGIDAVNGITTFNEGYSVSGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDA
VSEVDKLALQKTRVKLITV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaattcattcgagcgaaggaataagatcatccaattagtgaatgaacaggga
accgtgcttgttcaggatctggcgggagtatttgctgcctcggaagcgacaatccgtgcc
gatttgcgctttctcgaacaaaaaggcgtggttacgcgctttcatggtggtgcggcgaaa
ataatgtccggtaatagcgaaaccgagacccaggaagtcgggtttaaagagcgatttcag
ctcgccagcgcgccgaaaaacagaatagcgcaggcggcagtcaaaatgatccacgaaggg
atgaccgttattctcgacagcggaagtaccacaatgcttatcgccgaaggattaatgacc
gccaaaaatatcacggtgattaccaacagtctcccggcggcgtttgccctttccgaaaat
aaagacattactctggtcgtctgcggtggcacggtccgccataaaacgcgatctatgcat
ggatctattgctgaacgttccctgcaggatattaatgccgatttaatgtttgtcggtgct
gatggtattgatgcggttaatggtattacgacctttaatgaaggttattccgttagcggt
gcgatggtgacagcggcgaataaagtgattgccgttctcgattcatcgaaatttaatcgt
cgcggttttaatcaggtactgccaatcgaaaaaattgacattattattaccgatgatgct
gtgtctgaggtggataaactggcattgcagaagacacgggtaaaattaattacggtgtag
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