Escherichia coli O127 H6 E2348/69 (EPEC): E2348C_2853
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Entry
E2348C_2853 CDS
T00796
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ecg
Escherichia coli O127:H6 E2348/69 (EPEC)
Brite
KEGG Orthology (KO) [BR:
ecg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecg03009
]
E2348C_2853 (srmB)
Enzymes [BR:
ecg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E2348C_2853 (srmB)
Ribosome biogenesis [BR:
ecg03009
]
Prokaryotic type
rRNA helicases
E2348C_2853 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAS10401
UniProt:
B7UH16
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All DBs
Position
2942559..2943893
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AA seq
444 aa
AA seq
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MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLV
HLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN
VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLL
GKVGRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLAKRAEKKKAKEKEKPRVKKRH
RDTKNIGKRRKPSGTGVPPQTTEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggaagccctccag
gataaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcgtatctgctg
ccagcgttgcagcacctgctcgatttcccacgtaagaaatccggtccgccgcgtattttg
atcctcaccccaactcgcgagctggcgatgcaggtggccgatcatgcccgcgaactggcg
aaacatacgcatctggatattgccaccatcaccggcggcgtggcctatatgaaccacgca
gaagtgttcagcgaaaaccaggacattgtggtcgccacgaccggacgtctgctgcaatac
ataaaagaagagaacttcgattgccgcgcggttgaaacgctgatcctcgacgaagcagac
cgtatgctggatatgggcttcgcccaggatattgaacatattgctggcgaaacgcgctgg
cgtaaacagaccctgctcttttcggcaacgctggaaggcgatgcgattcaggactttgcc
gagcgtctgttggaagatccggtggaagtttctgccaatccgtccacccgtgagcgcaaa
aaaattcatcagtggtattaccgcgccgatgatcttgagcataaaaccgcgttgctggtg
catctgttaaaacagccggaagcgacccgctcaattgtgtttgtgcgtaagcgtgagcgt
gtgcatgagttggcaaactggctgcgcgaagcaggcatcaacaactgctatctcgaaggt
gagatggtacaaggcaagcgtaacgaagcgattaaacgcttgaccgaaggccgcgtaaac
gtactggttgctaccgatgttgccgcgcgcggtatcgacattcctgacgtcagccacgtc
tttaacttcgatatgccgcgcagtggcgatacttatttgcaccgtatcggacgtaccgcg
cgcgccggtcgtaaaggcaccgcgatttcgctggtggaagcccatgaccatctgctgctg
ggcaaagttggccgttatattgaagagccaattaaagctcgcgtaattgatgagttacgt
ccgaaaacgcgtgcgccaagcgagaagcagaccggcaagccatcgaagaaagtgttggct
aaacgtgccgagaagaaaaaagctaaagagaaagagaagccgcgggtgaaaaaacgccat
cgcgacactaaaaatattggtaagcgccgtaaaccaagcggaacgggcgtgccaccgcaa
acgacagaagagtaa
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