Escherichia coli O127 H6 E2348/69 (EPEC): E2348C_3089
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Entry
E2348C_3089 CDS
T00796
Symbol
recB
Name
(GenBank) exonuclease V (RecBCD complex), beta subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ecg
Escherichia coli O127:H6 E2348/69 (EPEC)
Pathway
ecg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E2348C_3089 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecg03400
]
E2348C_3089 (recB)
Enzymes [BR:
ecg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E2348C_3089 (recB)
DNA repair and recombination proteins [BR:
ecg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E2348C_3089 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
BscB_a-b
Motif
Other DBs
NCBI-ProteinID:
CAS10637
UniProt:
B7UHN7
LinkDB
All DBs
Position
complement(3189761..3193303)
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AA seq
1180 aa
AA seq
DB search
MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELL
VVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYKHLLEEIDDKAQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLHYQACADFWRRHCYPLPREIA
QVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETLASRHAQIVARIDAVKQQWRDAV
GELDALIESSGIDRRKFNRSNQAKWIEKISAWAEEETNSYQLPESLEKFSQRFLEDRTKA
GGETPRHPLFEAIEQLLAEPLSIRDLVITRALAEIRETVAREKRRRGELGFDDMLSRLDS
ALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQAIY
AFRGADIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKS
AGKNQALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALL
MNGDDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLL
QAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDAVVEEFDGYRQIWRKRGVMPM
LRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDS
NASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAVLDL
NAAPESVDLAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGR
LLQKGEAQDAAGLRTCIEALCDDDIAWQTAQIGDNQPWQVNDALTAELNARTLQRLPGDN
WRVTSYSGLQQRGHGIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHSLFE
DLDFTQPVDPNWVQEKLELGGFEPQWEPVLTEWITTVLLAPLNETGISLSQLSDRDKQVE
MEFYLPISEPLIASQLDALIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLD
YKSNWLGEDSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYERHFGGVIY
LFLRGVDKEHPQQGIYATRPNAGLIDLMDEMFAGMTLEEA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtcgccgagacactagatcctttgcgcttgcccttacagggcgagcgcctg
attgaagcctctgccggcacaggcaaaacctttacgattgcggcgctctatttgcgcctg
ttacttggactaggcggttctgccgcctttccccgcccgctgaccgttgaagaactgctg
gtggtgacctttaccgaggctgccacggcagaattgcgtggtcgtatccgtagcaatatc
cacgagttgcgcatcgcctgtctgcgtgaaaccaccgacaatccactgtacaaacacctg
ctggaagagatcgacgataaagcgcaagccgcgcagtggttgttgttagccgagaggcag
atggatgaagcggcagtctttactattcacggcttttgccagcgcatgctcaacctgaat
gcctttgaatccggcatgctgtttgagcagcagctgatcgaagatgagtctctgctacac
taccaggcctgcgccgatttctggcgtcgccactgctacccgctgccgcgtgaaattgcc
caggtcgtctttgaaacctggaaagggccgcaggcgttgctgcgcgatattaatcgttat
ctgcaaggcgaagcgccggttatcaaagcaccgccccccgatgatgaaacgctggcttcc
cgccacgcgcaaattgtggcgcgtattgatgccgtaaaacagcagtggcgcgacgcagtg
ggtgaactggatgcgctgatcgaatcttctggtattgatcgacgcaagtttaaccgtagc
aatcaggctaaatggatcgagaagatcagcgcctgggcagaagaagagaccaacagctat
cagttgccggagtcgctggaaaaattctctcagcgtttcttagaagatcgcacgaaagcc
gggggggaaaccccgcgacatccactgtttgaggcgatcgaacaactgcttgcagaacca
ttgtcgatccgcgatctggtgatcactcgcgcattggctgagatccgcgaaacagtagcg
cgtgaaaaacgccgccgtggcgaattgggttttgatgacatgttaagtcggctcgattcc
gcgctgcgtagtgaaagcggcgaggtattggcagcggcgatccgtacgcgattcccggtg
gcaatgatcgatgaatttcaggataccgacccccagcagtatcgaatttttcgccgtatc
tggcaccatcagccggaaaccgcattgttgctgattggcgacccgaaacaggctatttat
gcattccggggtgcggatatcttcacttatatgaaggcgcgtagcgaagttcatgctcac
tacaccttagataccaactggcgttccgcaccgggaatggtgaacagcgttaacaaactt
ttcagccagactgatgacgcgttcatgtttcgtgaaataccgtttattcctgtgaaatct
gccggcaaaaatcaggcgttacgttttgtgtttaaaggtgaaacgcagcctgcgatgaaa
atgtggctgatggaaggcgaaagctgcggcgttggcgactatcaaagtaccatggcgcag
gtatgtgctgcgcaaatccgcgactggttacaagccgggcaacgcggcgaagcgttgctg
atgaacggcgacgacgcgcgtccggtgcgtgcttcggacatcagtgtgctggtgcgcagc
cgccaggaggccgctcaggtgcgcgatgccttaacgctgctggaaatcccttccgtttac
ctttcgaaccgcgacagtgtttttgaaactctggaagcacaggagatgctttggctgttg
caggcggtgatgacgcccgaacgtgagaacaccctgcgcagtgcgctggcaacgtcaatg
atggggctgaatgcgctggatattgaaacgctgaataatgacgaacatgcgtgggatgcg
gtcgtcgaagagttcgatggttatcggcaaatctggcgcaaacgtggcgttatgccgatg
ctgcgggcgctgatgtcggcgcgtaacattgcagaaaacttgctggcaacggcaggcggt
gagcggcgtcttaccgatatcttgcatatcagcgaactgctacaagaagccggaacgcag
ctggaaagtgaacatgcgctggtacgctggttatcgcaacatatcctcgagccagacagt
aatgcctccagccaacaaatgcgcctcgaaagtgataaacatctggtgcagattgtcacg
atacacaaatcaaaagggctggaatatccgctggtctggttgccatttattaccaatttc
cgcgtccaggatcaggcgttttatcacgatcgccactcgtttgaggccgttctggatctt
aatgctgcgccagaaagcgtcgacctcgcggaggccgaacgtctggcggaagatctgcgt
ttactttacgtggcgctgacgcgttcggtttggcattgcagtctcggcgttgcaccgctg
gtgcgccgtcgtggcgataaaaaaggtgataccgacgtccaccaaagtgcgctcgggcgt
ttgctgcaaaaaggagaagcgcaagatgcggcagggcttcgtacctgtattgaagcgttg
tgcgatgatgatattgcctggcaaacggcacaaattggtgataaccagccctggcaggtt
aatgatgcattaactgcagaactgaatgcgaggacgctacaacgattgcccggcgataac
tggcgtgtcaccagctactccggtttgcagcagcgtggtcacggtatcgctcaggatctg
atgccacggctggatgttgatgccgcaggcgtggtcagcgtcgttgaagaaccgacgtta
acaccgcatcagttcccgcgcggtgcgtcaccggggacattcttgcacagtttgtttgaa
gacctcgattttacccagccggttgacccgaactgggtacaggaaaaactggagctcggt
ggctttgaaccgcagtgggaaccggtgttgactgagtggatcacaactgtcctcctggca
cctctcaatgaaacgggtattagcctgagtcagctttccgaccgcgataaacaggtggag
atggagttttacctgccaattagcgaaccgctcatcgccagccagcttgatgcactaatt
cgccagtttgacccgctatccgctggctgcccgccgctggagttcatgcaggtacgtggc
atgttaaaaggctttattgacctggtgttccgccacgaagggcgttattacctgctcgac
tataaatccaactggttgggtgaagacagttcggcttacacccaacaggctatggcagcg
gcaatgcaggcacaccgctatgatctgcaatatcagctttataccctggcgctgcaccgt
tatctgcgccatcgtattgctgattacgactatgagcgccactttggcggcgttatttat
ctgttcctgcgtggcgttgataaagaacatccgcaacaagggatctacgcgacccgaccc
aacgccggattgattgacctgatggatgagatgtttgccggtatgaccctggaggaggcg
taa
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