Escherichia coli O127 H6 E2348/69 (EPEC): E2348C_3880
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Entry
E2348C_3880 CDS
T00796
Symbol
rfaQ
Name
(GenBank) lipopolysaccharide core biosynthesis glycosyl transferase
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
ecg
Escherichia coli O127:H6 E2348/69 (EPEC)
Pathway
ecg00540
Lipopolysaccharide biosynthesis
ecg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
E2348C_3880 (rfaQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecg01005
]
E2348C_3880 (rfaQ)
Enzymes [BR:
ecg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
E2348C_3880 (rfaQ)
Lipopolysaccharide biosynthesis proteins [BR:
ecg01005
]
Core region
E2348C_3880 (rfaQ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
CAS11428
UniProt:
B7ULI7
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All DBs
Position
complement(4053438..4054460)
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AA seq
340 aa
AA seq
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MRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSENPEINALYGIKNKKAKASEK
IANFFHLIKVLRANKYDLIVNLTDQWMVAILVRLLNARVKISQDYHHRQSAFWRNSFTHL
VPLQGGNVVESNLSVLTPLGLESLVKQTTMSYPPASWKRMRRELDHAGVGQNYVVIQPTA
RQIFKCWDNAKFSAVIDALHARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKVT
FPELGALIDHAQLFIGVDSAPAHIAAAVNTPLISLFGATDHIFWRPWSNNMIQFWAGDYR
EMPTRDQRDRNEMYLSVIPAADVIAAVDKLLPSSTTGTSL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttcatggggatatgttattaactactcccgtcattagttcgctgaaaaaaaat
taccctgacgcaaaaatcgatgtgctgctttatcaggacaccatcccgatcctgtctgaa
aatccagagattaacgcgctctacggcataaaaaataaaaaagcaaaagcctcagaaaaa
attgccaacttttttcatctcatcaaggtattacgtgccaataagtatgaccttatcgtt
aatcttaccgatcaatggatggttgctatactggttcgcttattaaatgcccgtgtgaaa
atttcccaggattatcatcatcggcagtctgctttttggcgtaatagtttcactcatttg
gtgccgttgcagggtggaaatgtggtggaaagtaacttatccgtgctgacgccattggga
cttgaatcgttggtgaagcagacaaccatgagttacccgcctgcaagctggaaacgtatg
cgtcgcgaacttgatcacgctggtgttggacaaaattatgtggttatccaacctacggcg
cggcaaatcttcaaatgctgggacaacgccaagttttccgctgtgattgatgccttacat
gctcgtggttatgaagtcgttctgacgtccggcccagataaagacgatctggcctgcgtc
aatgaaattgcgcagggatgccagacgccaccagtaacggcgctggccggaaaggtgacc
ttcccggaacttggtgcgttaatcgatcatgcgcagctgtttattggcgttgattccgca
ccggcgcatattgccgctgcagttaatacgccgctgatatcgctgtttggtgcgacggac
catattttctggcgtccctggtcaaataacatgattcaattctgggcgggagattaccgg
gaaatgccaacgcgcgatcagcgtgaccgaaatgagatgtatctttcggttattccggcg
gcagatgtcattgcagctgtcgataaattacttccctcttccacgacaggtacgtcgtta
tga
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