Escherichia coli O127 H6 E2348/69 (EPEC): E2348C_4113
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Entry
E2348C_4113 CDS
T00796
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ecg
Escherichia coli O127:H6 E2348/69 (EPEC)
Pathway
ecg03420
Nucleotide excision repair
ecg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E2348C_4113 (uvrD)
03430 Mismatch repair
E2348C_4113 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecg03400
]
E2348C_4113 (uvrD)
Enzymes [BR:
ecg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2348C_4113 (uvrD)
DNA repair and recombination proteins [BR:
ecg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2348C_4113 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
E2348C_4113 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CAS11661
UniProt:
B7UND0
LinkDB
All DBs
Position
4296287..4298449
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG
TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgcgaagcggtggccgcg
ccacgcagcaaccttctggtgctggcgggcgcgggcagtggtaagacgcgcgtactggtg
catcgtatcgcctggttgatgagcgtggaaaactgctcgccgtattcgattatggcggtg
acatttaccaacaaagcggcggcggaaatgcgccatcgtatcgggcaactgatgggtacc
agccagggcggtatgtgggtcggcactttccacgggctggcacaccgtctgctgcgtgcg
caccatatggacgccaacctgccgcaggatttccagatcctcgacagcgaagaccagctg
cgcctgcttaagcgtctgatcaaagccatgaacctcgacgagaagcagtggccgccgcgc
caggcaatgtggtacatcaacagccagaaagatgaagggctgcgtccgcatcatattcaa
agctacggtaatccggtggagcagacctggcagaaggtgtatcaggcgtatcaggaagcg
tgtgaccgcgcgggcttggtggacttcgcggagctgcttttacgtgctcacgagttgtgg
cttaacaagccgcatatcctgcaacactaccgcgaacgttttactaacatcctggtggac
gaattccaggataccaacaacattcagtatgcgtggatccgcctgctggcgggcgatact
ggcaaagtgatgatcgttggtgatgacgaccagtcaatctacggctggcgcggggcgcag
gtggagaatattcagcgtttccttaatgatttccccggtgccgaaaccattcgtctggag
cagaactaccgctccactagcaacattctgagcgccgctaacgccctgattgaaaacaac
aacgggcgtttgggtaaaaagttgtggaccgatggcgcggacggtgagccgatttccctc
tattgcgcttttaacgaactcgacgaagcgcgttttgtggttaaccgtatcaagacctgg
caggataacggcggggcgctcgccgagtgcgccattctctatcgcagcaacgcccagtcg
cgcgtgctggaagaagcactgttgcaggcgagtatgccgtaccgtatttacggcgggatg
cgcttcttcgaacgccaggaaatcaaagatgcgctctcgtatttacgcctgattgccaac
cgcaacgacgacgcggcgtttgagcgcgtggtgaatacgccaacgaggggtattggtgac
cggacgctggacgtggtacgtcagacatcgcgcgatcgccagttaacactgtggcaggcg
tgccgcgaattattgcaggaaaaagcgctcgccgggcgtgctgccagcgctttgcaacgg
tttatggaactgatcgacgccttagcgcaagaaactgccgatatgccgctgcatgtacag
actgaccgggtaattaaagactccggcctgcgcaccatgtacgagcaggagaagggcgaa
aaaggtcagacgcgtatcgaaaacttagaggaactggtgacggcaacgcgccagttcagc
tacaacgaagaagacgaagatttaatgccgctgcaggcattcctctcccatgcggcgctg
gaagcgggcgaggggcaggcggatacctggcaggatgcggtgcagttgatgacgctacac
tcggcgaaaggtctggaattcccgcaggtgtttatcgttggtatggaagagggcatgttc
ccaagccagatgtcgctggatgaaggcgggcgtctggaagaagaacgccgtctggcctac
gttggcgtaacccgcgcgatgcagaaactgacgctgacctacgcggaaacccgccgtcta
tatggcaaagaggtttaccatcgcccgtcgcgctttatcggtgagttgccggaagagtgt
gtggaagaggtgcgcctgcgcgccacggtaagccgcccggtcagccatcaacggatgggt
acgccgatggtcgagaacgacagcggctacaagctcggccagcgcgtacgccacgctaag
tttggtgaaggcaccatcgtcaatatggaaggcagcggtgagcatagccgtttgcaggtg
gcgttccagggccagggtattaaatggctggtggcggcttacgcccgactggagacggta
taa
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