Escherichia coli O127 H6 E2348/69 (EPEC): E2348C_4170
Help
Entry
E2348C_4170 CDS
T00796
Symbol
polA
Name
(GenBank) fused DNA polymerase I 5'->3' exonuclease/3'->5'polymerase/3'->5' exonuclease
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ecg
Escherichia coli O127:H6 E2348/69 (EPEC)
Pathway
ecg03030
DNA replication
ecg03410
Base excision repair
ecg03420
Nucleotide excision repair
ecg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2348C_4170 (polA)
03410 Base excision repair
E2348C_4170 (polA)
03420 Nucleotide excision repair
E2348C_4170 (polA)
03440 Homologous recombination
E2348C_4170 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecg03032
]
E2348C_4170 (polA)
03400 DNA repair and recombination proteins [BR:
ecg03400
]
E2348C_4170 (polA)
Enzymes [BR:
ecg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2348C_4170 (polA)
DNA replication proteins [BR:
ecg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E2348C_4170 (polA)
DNA repair and recombination proteins [BR:
ecg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E2348C_4170 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2348C_4170 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAS11718
UniProt:
B7UNI6
LinkDB
All DBs
Position
4363079..4365865
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELELTCEQLEVQPPAAEELLGLFKKYEFKRWTADVEAGKWLQAK
GAKPAARPQETSVADEAPEVTATVISYDNYVTILDEETLKEWIAKLEKAPVFAFDTETDS
LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN
LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI
ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP
RKEAQKYMDLYFERYPGVLGYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE
RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI
HQLMENCTRLDVPLLVEVGSGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccccaaaatccacttatccttgtagatggttcatcttatctttatcgc
gcatatcacgcgtttcccccgctgactaacagcgcaggcgagccgaccggtgcgatgtat
ggtgtcctcaacatgctgcgcagtctgatcatgcaatataaaccgacgcatgcagcggtg
gtctttgacgccaagggaaaaacctttcgtgatgaactgtttgaacattacaaatcacat
cgcccaccaatgccggacgatctgcgtgcacaaatcgaacccttgcacgcgatggttaaa
gcgatgggactgccgctgctggcggtttctggcgtagaagcggacgacgttatcggtact
ctggcgcgcgaagccgaaaaagccgggcgtccggtgctgatcagcactggcgataaagat
atggcgcagctggtgacaccaaatatcacgcttatcaacaccatgacgaataccatcctc
ggaccggaagaggtggtgaataagtacggcgtgccgccagaactgatcatcgatttcctg
gcgctgatgggtgactcctctgataacattcccggcgtaccgggcgtcggtgaaaaaacc
gcgcaggcattgctgcaaggtcttggcgggctggatacgctgtatgccgagccagaaaaa
attgctgggttgagcttccgtggcgcgaaaacaatggcagcgaagctcgagcaaaacaaa
gaagttgcttatctctcataccagctggcgacgattaaaaccgacgttgagctggagctg
acctgtgaacaactggaagtgcagccaccggcggcggaagagttgttagggctgttcaaa
aagtatgagttcaaacgctggactgctgatgtcgaagcgggcaaatggctacaggctaaa
ggggcgaaacccgcagccaggccgcaggaaaccagtgttgcagacgaagcgccagaagtg
acggcaacggtgatttcttatgacaactacgtcaccatccttgatgaagaaacactgaaa
gagtggattgcgaagctggaaaaagcgccggtatttgcatttgataccgaaaccgacagc
cttgataacatctctgctaacctggtcgggctttcttttgctatcgagccaggcgtagcg
gcatatattccggttgctcatgattatcttgatgcgcccgatcaaatctctcgcgagcgt
gcactcgagttgctaaaaccgctgctggaagatgaaaaggcgctgaaggtcgggcaaaac
ctgaaatacgatcgcggtattctggcgaactacggcattgaactacgtgggattgcgttt
gataccatgctggagtcctacattctcaatagcgttgccgggcgtcacgatatggacagc
ctcgcggaacgttggttgaagcacaaaaccatcacttttgaagagattgcgggtaaaggc
aaaaatcaactgacctttaaccagattgccctcgaagaagccggacgttacgccgccgaa
gatgcagatgtcaccttgcagttgcatctgaaaatgtggccggatctgcaaaaacacaaa
gggccgttgaacgtcttcgagaatatcgaaatgccgctggtgccggtgctttcacgcatt
gaacgtaacggtgtgaagatcgatccgaaagtgctgcacaatcactctgaagagctcacc
ttgcgtctggctgagctggaaaagaaagctcatgaaattgcaggtgaagaatttaacctt
tcttccaccaagcagttacaaaccattctgtttgaaaaacagggcattaaaccgctgaag
aaaactccgggtggcgcgccgtcaacgtcggaagaggtactggaagaactggcgctggac
tatccgttgccaaaagtgattctggagtatcgtggtctggcgaagctgaaatcgacctac
accgacaagctgccgttgatgatcaacccgaaaaccgggcgtgtacatacctcttatcac
caggcagtaaccgcaacgggacgtttatcgtcaaccgatcctaacctgcaaaacattccg
gtgcgtaacgaagaaggtcgccgtatccgccaggcgtttattgcgccagaggattatgtg
attgtctcagcggactactcgcagattgaactgcgcattatggcgcatctctcgcgtgac
aaaggcttgctgaccgcattcgcggaaggaaaagatatccaccgtgcaacggcggcagaa
gtgtttggtttgccactggaaaccgtcaccagcgagcaacgtcgtagcgcgaaagcgatc
aactttggtctgatttatggcatgagtgctttcggtctggcgcggcaattgaacattccg
cgtaaagaagcgcagaagtacatggacctttacttcgaacgctaccctggcgtgctgggg
tatatggaacgcacccgtgctcaggcgaaagagcagggctacgttgaaacgctggacgga
cgccgtctgtatctgccggatatcaaatccagcaatggtgctcgtcgtgcagcggctgaa
cgtgcagccattaacgcgccaatgcagggaaccgccgccgacattatcaaacgggcgatg
attgccgttgatgcgtggctacaggctgagcaaccgcgtgtgcgtatgatcatgcaggta
cacgatgaactggtatttgaagtccataaagatgatgtcgatgccgtcgcgaagcagatt
catcaactgatggaaaactgtacccgtctggatgtgccgttactggtggaagtggggagt
ggcgaaaactgggatcaggcgcactaa
DBGET
integrated database retrieval system
