Ehrlichia chaffeensis Arkansas: ECH_0050
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Entry
ECH_0050 CDS
T00328
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ech
Ehrlichia chaffeensis Arkansas
Pathway
ech00300
Lysine biosynthesis
ech00470
D-Amino acid metabolism
ech01100
Metabolic pathways
ech01110
Biosynthesis of secondary metabolites
ech01120
Microbial metabolism in diverse environments
ech01230
Biosynthesis of amino acids
Module
ech_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ech00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ECH_0050 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ECH_0050 (dapF)
Enzymes [BR:
ech01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ECH_0050 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
HEAT_GCN1_C_2
DUF5023
LeuA_dimer
Motif
Other DBs
NCBI-ProteinID:
ABD45183
UniProt:
Q2GI52
LinkDB
All DBs
Position
complement(45664..46467)
Genome browser
AA seq
267 aa
AA seq
DB search
MIDFIKMHGTSNDFVIIDCRKKSYSNINYKAIANRKTGIGCDQIIIITESEKADCFMHIY
NADGSKVEMCGNAARCVGYLLSNEKQDNNITIELSDRILSCLRTSENRVQVNIGVAKFHW
TDIPTSQECDTLHLPIELEMLSDPVGINVGNPHAIFFVDSIETIPLDKLGPKLENHHLFP
KRANISIAEIVSRDKIKLRVWERGTGETASCGSGACAALVAAIRRQYTNKTAVVCLQGGD
LLISYQHDNTILMEGMVSYIFNGIYRV
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgatagattttataaaaatgcatggaacctctaatgattttgtaatcatagattgtagg
aaaaaatcttatagtaacattaactataaagcaattgccaatagaaaaacaggtattggt
tgtgaccaaatcattattataacagaatctgaaaaagcagattgctttatgcacatatat
aatgcagatggaagcaaagttgaaatgtgcggaaatgctgcaagatgtgttggatactta
ttaagcaatgaaaaacaagataataatataacaattgaactatctgaccgtatattatca
tgtttaaggacatcggaaaatagagtacaagtcaacataggagtagcaaaattccattgg
acagatatacctacatctcaagaatgtgatactttgcacttacctatagaattagaaatg
ttaagcgatcctgtaggaataaatgtagggaatcctcatgcaatattttttgttgattcc
atagagacaattccactagataaactaggaccaaaactagaaaatcatcaccttttcccc
aaaagggcaaacattagtattgctgaaattgtatccagagataaaataaaacttagggtc
tgggaacgcggaactggggagacagcctcatgtggcagcggagcatgtgcagcattagtc
gcagcaataagacgtcaatacaccaacaagacagcagtcgtatgtttacaaggtggtgat
ttattaatatcataccaacatgataacactattttaatggaagggatggtatcatatata
ttcaatggcatttatcgtgtctaa
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