Ehrlichia chaffeensis Arkansas: ECH_0300
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Entry
ECH_0300 CDS
T00328
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ech
Ehrlichia chaffeensis Arkansas
Brite
KEGG Orthology (KO) [BR:
ech00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ech03016
]
ECH_0300
Enzymes [BR:
ech01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ECH_0300
Transfer RNA biogenesis [BR:
ech03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ECH_0300
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Ofd1_CTDD
Motif
Other DBs
NCBI-ProteinID:
ABD45288
UniProt:
Q2GHG2
LinkDB
All DBs
Position
286446..287609
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AA seq
387 aa
AA seq
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MLIDTVKELERLCNQLLVLQPKFIAVDTEFVRSSSEYYPKLCLIQIAYGKEQFVIDVLAK
DMDLSVLGHIFYNESIIKVFHDCRQDIDALLTKFPEIPSPIFDTQIAAMFCCCYDNAVGY
SKLVEQFLGISLDKLSLKRSNWALRPLSADKIQYALNDVIYLYELYQILYNNLLDAGKLP
WFLEEMNNIVLQEVNCNDVCDIPDFGSDMTKEEIIVVRSVIEWRERLAKFFNLNREFILK
NKVMLSLVRDFIKKSDISTLGKYIKKEYLSCDAVSDLLQVIDNNQSVNIDELHYVSVNSY
NKSVLNVLLILLYNMCYKNNISQKLVASKGGLIRFLNGKFSYVMKGWRYEFFGCEVEKFM
QGKSKIIVSAQVLDNDCMDIVTTLTEM
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgttaattgatactgtcaaagaattagagcgtttgtgtaatcagctgcttgtattgcaa
cctaaatttattgcagttgatactgaatttgtaagaagtagtagtgaatattatcctaaa
ttatgtttaattcaaattgcatatggtaaagaacagtttgttattgatgttttagcgaaa
gatatggatttatcagttttaggacatattttttataatgaaagtataataaaagttttt
catgattgtagacaagatatagatgcattgttaacaaaatttccagaaattcctagccct
atatttgatactcaaattgctgccatgttttgttgttgttatgataatgcagttggatat
tctaagttagtagagcaatttttaggtatttcattagataagctgagcttgaaaagatct
aattgggcgcttcgaccattatctgctgataaaatccagtatgcacttaacgatgttata
tatttgtatgagctttatcaaatattatataacaatttattagatgctggaaagttacct
tggtttttggaagagatgaataatatagtgttacaggaagttaactgtaatgatgtttgt
gatattcctgattttggttctgatatgacaaaagaggagattattgttgtaagatctgta
attgaatggcgagaaagattagcaaagttttttaatcttaatcgcgaatttatattaaaa
aacaaggtaatgctatctttagttagagattttataaaaaaaagtgatattagtacttta
ggtaagtatataaagaaagaatatttatcatgtgatgcagtgtctgatcttttacaagtt
attgataataatcaatctgttaatattgatgagttacattatgtaagtgttaatagttat
aataagtctgttttaaatgtgctgcttatattgttatataatatgtgttacaaaaataat
atctcacagaagttagttgcatctaaaggtggcctaattaggtttcttaacggtaagttt
agttatgtaatgaaaggttggagatatgaattttttggatgcgaagttgagaaatttatg
caaggaaaatctaagattatagtctcagcacaagtactggataatgattgtatggatatt
gtaactactttgacggaaatgtag
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