Ehrlichia chaffeensis Arkansas: ECH_0860
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Entry
ECH_0860 CDS
T00328
Name
(GenBank) helicase, UvrD/Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ech
Ehrlichia chaffeensis Arkansas
Pathway
ech03420
Nucleotide excision repair
ech03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ech00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECH_0860
03430 Mismatch repair
ECH_0860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ech03400
]
ECH_0860
Enzymes [BR:
ech01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECH_0860
DNA repair and recombination proteins [BR:
ech03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECH_0860
MMR (mismatch excision repair)
Other MMR factors
ECH_0860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
ResIII
flgE_D3
DUF1195
Motif
Other DBs
NCBI-ProteinID:
ABD44867
UniProt:
Q2GFX8
LinkDB
All DBs
Position
881517..883436
Genome browser
AA seq
639 aa
AA seq
DB search
MEDYITSLNEDQREAVININGPILILAGAGTGKTRTITSRIAYIINNNFALPSQILAVTF
TNKAANEMLSRISELTPVYNIWLGTFHAIAAKILRQHAEVVGLKNDFTIINTDDQLQVIK
NIVNDMHPEYASDAHKIILNKIQRWKDRGLIPSNITETELYKPINTVALSTYHIYQERLK
FLNCVDFGDLLLYNIQIFTTQHNVLSHYQEQFKYIMVDEYQDINTIQYLWLRLLAQKYKN
LCCVGDDDQSIYSWRGAEVGNILKFSDDFPNAKIVRLECNYRSTSNILDVATAIINNNKS
RLGKKLWTTNEKGQKVNLMKFWDSKAEAQYICEYIKNLHDYQFNETAILVRAGFQTRIFE
EYFIKYSIPYKIIGGTRFYDRQEIRDIIAYLKITVNPNNDIAFERIINKPKRHIGASTLN
KIYLCAKQNNTYFLNAAKILISNNQLPDKASRSLNNLLNKIDSWKESLSSDSISNTVKMI
AYDSGYVDMLENEGENGLARIENIKELFSALLSFNDVNEFLEHISLVTETDSLNYNDNYT
YIMTLHAAKGLEFPIVFLPGWEEGVFPHEKSLQDRTGEALEEERRLAYVGITRAREQLFI
SCVAVRDINNWRQQMKISRFIKELPAEHVQVIKNISSYY
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaagattatataacttcacttaatgaagaccagagggaagctgtcattaatataaat
ggtcctattttaatattagccggagcaggtacaggtaaaactagaactattacttcaaga
atagcatacatcattaataacaattttgcattacctagccaaattttagcagtaacattt
actaataaagcagcaaacgaaatgctatctagaattagtgaattaacacctgtatataat
atctggttaggaacttttcatgcaatagcagcaaaaatcttaagacagcatgctgaagta
gttggattaaaaaacgattttacaatcattaacacagacgaccaactacaagtaataaaa
aatattgtcaatgacatgcatcccgaatatgcatcagatgcccataaaattatcttaaat
aaaatacaaagatggaaagatagaggacttataccaagcaatattactgaaacagagtta
tataaacctattaatacagtagcattgagtacatatcacatttatcaagaaagattaaaa
tttttaaactgcgttgattttggagacttactactatacaacattcaaatattcactaca
caacataatgtcttatcccattaccaagaacaatttaaatacataatggttgatgaatat
caggacataaatacaattcaatatttatggttaagattattagctcaaaaatacaaaaat
ctatgctgtgttggagatgatgaccaatcaatatatagttggcggggagcagaagtagga
aatattttaaaattttctgatgattttccaaatgcaaaaattgttcgattagaatgtaac
tacagatcaacatctaatatattagacgttgccacagcgataataaataacaataaatca
aggttaggaaaaaagctatggacaacaaacgagaaaggacaaaaagttaatttaatgaaa
ttttgggatagtaaagcagaagcacagtatatatgtgaatatattaaaaatttacatgac
taccaatttaacgagacagctattttagtaagggcaggatttcaaacaagaatattcgag
gaatacttcattaaatatagcataccatataagataattggtggtacaagattctacgat
agacaagaaattcgtgatatcatcgcctatttaaaaattacagttaaccctaataatgac
atcgcttttgaaagaataattaataaacctaaacgacatataggagcatcaactcttaat
aaaatatacttatgtgctaaacaaaataatacatattttttgaacgcagcaaaaattcta
atttcaaataatcaactacctgacaaagcatcccgatctttaaataacttattaaataag
attgactcttggaaagaatctttatcatctgattcaatatcaaacactgttaaaatgata
gcttacgactcaggatatgtagacatgttagaaaacgaaggtgaaaatggtttagcaaga
atagaaaacataaaagaacttttttctgcattattaagttttaatgatgtaaatgaattt
ttagaacacatcagccttgtaacagaaacagactcattaaattacaatgacaactacaca
tatattatgacattacatgcagcaaaaggattagaattccctatagtttttctacctgga
tgggaagaaggagtatttccacatgaaaaatctttacaagacagaacaggagaagcacta
gaagaagagagaagactcgcctatgttgggattacacgagcacgtgaacaactatttata
tcatgcgtagcagtaagagatattaacaactggcgccagcaaatgaaaatatcaagattt
ataaaggaattacctgcagaacatgtacaagttataaaaaatatttctagctattattaa
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