Ehrlichia chaffeensis Arkansas: ECH_0994
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Entry
ECH_0994 CDS
T00328
Symbol
rho-1
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ech
Ehrlichia chaffeensis Arkansas
Pathway
ech03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ech00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECH_0994 (rho-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ech03021
]
ECH_0994 (rho-1)
03019 Messenger RNA biogenesis [BR:
ech03019
]
ECH_0994 (rho-1)
Transcription machinery [BR:
ech03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ECH_0994 (rho-1)
Messenger RNA biogenesis [BR:
ech03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ECH_0994 (rho-1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
OB_RNB
AAA
AAA_25
S1CSD-TOTE-2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABD45313
UniProt:
P0CH92
LinkDB
All DBs
Position
complement(1018570..1019838)
Genome browser
AA seq
422 aa
AA seq
DB search
MLDLSELKKKTIEDLLKIAEDLGVVSNGRMLKQEIIFHLMKKVVSDGGAAIGGGVVEILS
DGFGFLRSPEANYAASGDDVYISAGQIKKFNLRTGDIVSGEIRAPSEKERYFTLVKAHSI
NFTDMAKLQRYVHFDDLIPLYPEERILLECNDPISVSKKDISMRVIDIVAPLGKGQRALI
VAPPRAGKTIILQQIAHSISVNHPDIELIVLLIGERPEEVTDMCRSVKGEVVSSTFDEPG
YRHVQLAEIVIEKAKRMVEHKKNVVILLDSITRLARAYNSVIPSSGKVLTGGVDSNALQR
PKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNCEIILDRKISDKRVYP
AIDISKSGTRKEDMLIDSVCLKKVWLLRRLLSSMGSVEAMEFLRDKLLITKDNNEFFDMM
NS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgttagatctgagtgagctaaaaaagaagacaatagaagatttgttgaaaatagcagaa
gaccttggagtggttagtaatggtagaatgctgaaacaagaaataatatttcacttaatg
aaaaaagtagtaagtgatggaggtgcagcaataggaggaggggtagtagagatattatct
gatggttttggattcttaaggtctcctgaagcaaattatgctgcaagtggtgatgatgta
tatatttctgcaggacaaataaaaaagtttaatttaagaacaggtgatatagtaagtggt
gaaataagagcgccaagtgagaaagaaaggtattttacgttagtaaaagcacatagtata
aactttacagatatggcaaagttacaaagatatgtacactttgatgatttaatacctttg
tatccagaagaaagaatattattagaatgtaatgatcctatcagcgtgagtaaaaaagat
ataagcatgagagtaatagatatagttgctccattaggtaaaggacaaagagcgctgata
gttgctccaccaagagcaggaaaaacaataatattacaacaaatagcacattcaatatct
gtaaatcatccagatatagaattgatagttttacttataggtgaaagaccagaagaagtg
acagatatgtgtagatctgtgaaaggagaggtagtaagttctacatttgatgaacctgga
tatagacatgtacaacttgcagaaattgtaatagaaaaagcaaaaagaatggtagaacat
aaaaagaatgtagtgatattacttgattcaattacaagattagcaagagcatataattca
gtaataccgtcatcaggaaaagtattaactggtggagtagattctaatgctttacaaaga
ccaaaaagattttttggagcggcaagaaatatagagaatggaggatcattgacaataata
gcaacggcactgattgaaacagggtcaaaaatggatgaagtgatatttgaagaatttaaa
ggtacaggaaattgtgaaataatattagatagaaaaatatctgataaaagagtatatcca
gcaatagatatttcaaaatctggtacaaggaaagaagatatgttgatagatagtgtgtgt
ttgaagaaagtatggttattaagaaggctattgtcatcgatgggatctgttgaagcaatg
gaatttttaagggataaattgttgataaccaaagacaataatgaattctttgatatgatg
aatagttaa
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