Ehrlichia chaffeensis Heartland: ECHHL_0166
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Entry
ECHHL_0166 CDS
T03085
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
echa
Ehrlichia chaffeensis Heartland
Pathway
echa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
echa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECHHL_0166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
echa03021
]
ECHHL_0166
03019 Messenger RNA biogenesis [BR:
echa03019
]
ECHHL_0166
Transcription machinery [BR:
echa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ECHHL_0166
Messenger RNA biogenesis [BR:
echa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ECHHL_0166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
OB_RNB
AAA
AAA_25
S1CSD-TOTE-2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHX03337
LinkDB
All DBs
Position
181211..182599
Genome browser
AA seq
462 aa
AA seq
DB search
MSESEDIVLEKEEEKEVVEVQEEIIEEKEEEKVPEQQEVKVLDLSELKKKTIEDLLKIAE
DLGVVSNGRMLKQEIIFHLMKKVVSDGGAAIGGGVVEILSDGFGFLRSPEANYAASGDDV
YISAGQIKKFNLRTGDIVSGEIRAPSEKERYFTLVKAHSINFTDMAKLQRYVHFDDLIPL
YPEERILLECNDPISVSKKDISMRVIDIVAPLGKGQRALIVAPPRAGKTIILQQIAHSIS
VNHPDIELIVLLIGERPEEVTDMCRSVKGEVVSSTFDEPGYRHVQLAEIVIEKAKRMVEH
KKNVVILLDSITRLARAYNSVIPSSGKVLTGGVDSNALQRPKRFFGAARNIENGGSLTII
ATALIETGSKMDEVIFEEFKGTGNCEIILDRKISDKRVYPAIDISKSGTRKEDMLIDSVC
LKKVWLLRRLLSSMGSVEAMEFLRDKLLITKDNNEFFDMMNS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatcagaagatattgtattagagaaagaagaagagaaagaagtagtagaggta
caagaggaaataatagaagagaaagaagaagagaaagtaccagaacaacaagaagtaaaa
gtgttagatctgagtgagctaaaaaagaagacaatagaagatttgttgaaaatagcagaa
gaccttggagtggttagtaatggtagaatgctgaaacaagaaataatatttcacttaatg
aaaaaagtagtaagtgatggaggtgcagcaataggaggaggggtagtagagatattatct
gatggttttggattcttaaggtctcctgaagcaaattatgctgcaagtggtgatgatgta
tatatttctgcaggacaaataaaaaagtttaatttaagaacaggtgatatagtaagtggt
gaaataagagcgccaagtgagaaagaaaggtattttacgttagtaaaagcacatagtata
aactttacagatatggcaaagttacaaagatatgtacactttgatgatttaatacctttg
tatccagaagaaagaatattattagaatgtaatgatcctatcagcgtgagtaaaaaagat
ataagcatgagagtaatagatatagttgctccattaggtaaaggacaaagggcgctgata
gttgctccaccaagagcaggaaaaacaataatattacaacaaatagcacattcaatatct
gtaaatcatccagatatagaattgatagttttacttataggtgaaagaccagaagaagtg
acagatatgtgtagatctgtgaaaggagaggtagtaagttctacatttgatgaacctgga
tatagacatgtacaacttgcagaaattgtaatagaaaaagcaaaaagaatggtagaacat
aaaaagaatgtagtgatattacttgattcaattacaagattagcaagagcatataattca
gtaataccgtcatcaggaaaagtattaactggtggagtagattctaatgctttacaaaga
ccaaaaagattttttggagcggcaagaaatatagagaatggaggatcattgacaataata
gcaacggcactgattgaaacagggtcaaaaatggatgaagtgatatttgaagaatttaaa
ggtacaggaaattgtgaaataatattagatagaaaaatatctgataaaagagtatatcca
gcaatagatatttcaaaatctggtacaaggaaagaagatatgttgatagatagtgtgtgt
ttgaagaaagtatggttattaagaaggctattgtcatcgatgggatctgttgaagcaatg
gaatttttaagggataaattgttgataaccaaagacaataatgaattctttgatatgatg
aatagttaa
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