Enterobacter chengduensis: FY206_08025
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Entry
FY206_08025 CDS
T06229
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
echg
Enterobacter chengduensis
Pathway
echg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
echg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FY206_08025 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
echg03019
]
FY206_08025 (rhlE)
Enzymes [BR:
echg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FY206_08025 (rhlE)
Messenger RNA biogenesis [BR:
echg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FY206_08025 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QEL35357
LinkDB
All DBs
Position
1620693..1622075
Genome browser
AA seq
460 aa
AA seq
DB search
MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVRDYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDSIEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIETPGYEVDPSIKAEPIQNGRQGGGRGQGGGGRGQQPRRAEGGAPKPAGK
PPRRSNDGKPSGENPWRSGEGKPAGEGQRRRRPRKPANPQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaacccggaaattctgcgcgcgatcgcagagcagggc
tacgttgagccaaccccaatccagcagcaggctattcctgccgttcttcagggccgtgac
ctgatggccagcgcccagaccggtaccggtaaaaccgcgggctttacgctgccgctgtta
gagctgctggtaaaaaaccagccgcacgccaaagggcgtcgtccggttcgtgccctgatc
ctgaccccaacccgcgagctggcggcgcagattggcgagaacgtgcgtgactacagccgc
tatctcaacattcgctcgctggtcgttttcggcggcgtcagcatcaacccgcagatgatg
aagctgcgcggcggcgtggacgtgctggtggcaacgccgggtcgtctgctggatctcgaa
caccagaacgcggtgaagctcgatagcatcgaaattctggtgctggacgaagccgaccgc
atgctggacatgggcttcatccacgacattcgtcgcgtgctggctaagctgcccgcgcgt
cgtcagaacctgctcttctccgcgaccttctccgacgagatcaaggcgctggcggaaaag
ctgctgcataacccgctggaagtggaagtggcgcgccgcaacaccgcctccgagcaggtg
acgcagcacgttcactttgtggataaaaagcgcaagcgggaactgctctcccagatgatc
ggccagggtaactggcagcaggtgctggtcttcacccgcaccaagcacggcgcgaatcac
ctggcggaacagctgaataaagacggcatccgcagcgccgccattcacggtaacaagagc
cagggcgcgcgtacccgtgcgctggcggacttcaagtccggcgacattcgcgtgctggtg
gcaaccgacattgccgcccgtggtctggacattgaagagctgccgcacgtggtgaactac
gagctgccaaacgtgccggaagactacgtgcaccgtattggccgtaccggccgcgcggct
gcaaccggtgaggcgctctctctggtctgcgtggatgaacacaagctgctgcgcgacatc
gaacgcctgctgaagaaagagatcccgcgcatcgaaaccccgggctatgaagtggatccg
tccatcaaggccgagccgattcagaacggtcgtcagggtggcggtcgcggtcagggcggc
ggcggtcgcggtcagcagccgcgtcgtgccgaaggcggcgcgccgaagccagcgggcaaa
ccgccgcgtcgtagcaacgacggcaaaccgtccggtgaaaacccgtggcgcagcggcgaa
ggcaagccggcaggagaagggcagcgccgacgccgcccgcgcaagcctgctaacccgcag
taa
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