Enterobacter chengduensis: FY206_13585
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Entry
FY206_13585 CDS
T06229
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
echg
Enterobacter chengduensis
Brite
KEGG Orthology (KO) [BR:
echg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
echg03016
]
FY206_13585
Enzymes [BR:
echg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FY206_13585
Transfer RNA biogenesis [BR:
echg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FY206_13585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
QEL36390
LinkDB
All DBs
Position
2791118..2793052
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
MAVIHTEKDRESAEPEELIEPFLTRFVGKVQRKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFGADHFVPWWVTLARHNLEKEAPNGVAT
EMQDEGLTRRDLTGLEFVTIDSASTEDMDDALYAEESADGKLHLTVAIADPTAWIAEGSK
LDDAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRPNEVRPVLACRMTIAADGAIEDDIEF
FAATIESKAKLAYDNVSDWLENTGSWKPESDAIAAQIRLLHRICLNRGEWRKTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEEAMISANICAARVLRDKLGFGIYNVHTGFD
PANTEALAALLKNHDVHVDPEEVLTLPGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLDAYATWTSPIRKYGDMVNHRLLKAIIKGEAVARPQEDTTLQMADRRRLNRM
AERDVGDWLYARFLQDKAGTDTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
MVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgtgcagaaggggtcgtaaaagccacggaaaagggctttggcttccttgaagttgacgcg
cagaaaagctacttcattccgccaccgcagatgaagaaagtgatgcatggcgatcgcgtc
atggccgtcattcataccgagaaggaccgagagtctgccgagccggaagaactgatcgaa
ccgttcctgacccgttttgtgggtaaggtgcagcgaaaagacgatcgtctttctatcgtg
ccggatcatcccctgctgaaagatgccattccctgccgcgccgcccgtggcgttgagcat
gattttaaagaaggtgactgggccgtagcagaaatgcgccgtcatcctctgaaaggcgat
cgcggtttttatgctgagctgacccagttcatcacctttggcgctgaccatttcgtgcca
tggtgggtcacgctggcacgccacaatcttgaaaaagaagcgccgaacggcgtggcaacc
gagatgcaggacgaaggtctgacgcgtcgcgatctcaccgggctggagtttgtcactatc
gacagcgccagcaccgaagatatggacgatgcgctctacgctgaagagagcgccgacggc
aagctgcacctgaccgtcgcgattgccgatcccaccgcctggattgccgaaggcagcaag
ctggatgacgcggcgaaaatccgcgccttcaccaactacctgccgggcttcaacattccg
atgctgccgcgcgaactgtcagacgatctctgctcgctgcgtccaaatgaagtgcgcccg
gtccttgcctgccgcatgaccattgctgcggatggcgcgattgaagacgatattgagttc
tttgccgccaccatcgagtcgaaagccaaactggcctacgataacgtctccgactggctg
gaaaacaccggcagctggaagcctgaatccgacgccattgccgcgcagatccgcctgctg
catcgcatctgcctgaaccgcggcgagtggcgtaaaacccatgcgctggtgttcaaagat
cgcccggattatcgctttgttctgggcgagaaaggcgaagtgctggacatcgtggccgaa
ccgcgacgcattgctaaccgcatcgttgaagaggcgatgatttcagccaatatctgtgcc
gcgcgcgtgctgcgcgacaagctgggctttggtatttacaacgtccataccgggttcgat
ccggcgaataccgaagcgctggcggccctgctgaaaaatcacgatgtgcacgttgatccg
gaagaagtgctgaccctgccgggcttctgcaagcttcgccgcgaactggacgcacagccg
tcaggtttcctggacagccgcattcgtcgcttccagtcctttgctgaaatcagcaccgag
cctggcccgcactttggtctcggcctcgacgcttacgccacctggacatcgccgatccgt
aagtatggcgatatggttaaccaccgtctgctgaaagcgattatcaaaggtgaagccgtt
gcccgtcctcaggaggacaccacgctgcagatggccgatcgtcgccgcctgaaccgcatg
gcggagcgtgacgttggagactggctgtacgcgcgcttcctgcaggataaagccggaacc
gatacccgctttgcggcggaaatcatcgatgtcagccgcggcgggatgcgcgtccgcctg
gtcgataacggtgctgttgcgtttattcctgcaccgttcctgcatgcggtgcgtgacgaa
atggtctgtagtcaggaaaacggtaccgtgcagattaaaggtgaaacagtttacaaagtc
accgacgtgattgacgtgactatcgccgaagttcgcatggaaacccgcagtattatcgcg
cgtcctgtcgcctga
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